Gene PSPTO_0385 details

Gene Information

• Locus tag: PSPTO_0385
• Symbol: tkt
• ID: 1181994
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 425999
• End bp: 427996
• Gene Length: 1998 bp
• Protein Length: 665 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637391753
• Product: transketolase
• Protein accession: NP_790234
• Protein GI: 28867615
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAGCC GTCGTGAGCG TGCCAATGCT ATTCGTGCCC TAAGCATGGA TGCCGTGCAA 
AAAGCCAACA GCGGCCATCC GGGTGCCCCG ATGGGCATGG CGGATATCGC GGAGGTTCTG 
TGGCGCGATT ATCTGAAACA CAACCCGACC AACCCGTCGT TTGCCGACCG TGACCGCTTC 
ATCATGTCCA ACGGCCACGG CTCGATGCTG GTCTATTCAC TGCTGCACCT GACCGGCTAT 
GACCTGTCCA TCGACGATCT GAAAAACTTC CGTCAGTTGC ACAGCCGCAC GCCGGGCCAC 
CCGGAGTTCG GCTACACCCC AGGCGTTGAA ACCACCACTG GCCCACTGGG TCAGGGTTTT 
GCCAATGCCG TCGGTTTCGC CGCTGCCGAG AAGACACTCG CTGCACAGTT CAACCGTCCA 
GGCCACTCCA TCGTTGATCA CCATACCTAC GTGTTCATGG GTGATGGCTG CATGATGGAA 
GGCATTTCTC ACGAAGTCGC CTCCCTGGCC GGTACGCTGC AACTGGGCAA ACTGATCGCG 
TTCTACGATG ACAACGGCAT CTCCATCGAC GGCGAAGTTG AAGGCTGGTT CACCGATGAC 
ACGCCAAAGC GCTTTGAAGC CTACGGCTGG CAGGTCATTC GCAATGTCGA CGGTCATGAC 
GCCGACGAGA TCAAGACCGC CATCGACACG GCCCGCAAAA GCGATCAGCC AACGCTGATC 
TGCTGCAAGA CCACCATCGG TTTCGGCTCG CCGAACAAGC AGGGTAAGGA AGAATCCCAC 
GGTGCACCGC TGGGCGCTGA CGAAATCGCC CTGACCCGCG CTGCCCTGAA GTGGAACCAT 
GGTCCTTTTG AAATCCCGGC TGATATCTAC GCCGAGTGGA ATGCGAAGGA AAAAGGTCTG 
GCTGTTGAAG CCGAGTGGGA CCAGCGCTTT GCTGCCTACT CTGCTGCCTT CCCGGAGCTG 
GCCAATGAAT TTATCCGTCG CATGAGCGGC GAACTGCCTG CTGACTTTGC CGAGAAGTCG 
GCGGCTTACG TTGCCGAAGT CAACGCCAAG GGCGAAACCA TTGCCAGCCG CAAGGCCAGT 
CAGAACGCGC TGAGCGCACT GGGCCCGTTG CTGCCGGAAA TTCTCGGCGG TTCGGCTGAC 
CTGGCCGGTT CCAACCTGAC CATCTGGAAA GGCTGCAAGA GCATCACCGG CGAAGACCCT 
AACGGCAACT ACCTGCATTA CGGCGTTCGC GAATTCGGCA TGGCCGCCAT GATGAACGGT 
ATCGCTCTGC ACGGTGGCTT CGTGCCATAC GGCGCAACCT TCCTGATCTT CATGGAATAC 
GCGCGCAATG CGGTGCGTAT GGCCTCGTTG ATGAAGAAGC GCGTGATCTA CGTGTTCACC 
CATGACTCTA TCGGTCTGGG CGAAGACGGT CCGACTCACC AGCCAATCGA GCAGCTGACC 
AGCCTGCGTA CCACGCCGAA CCTGGACACC TGGCGTCCGG CAGATGCCGT TGAATCGGCT 
GTGGCCTGGA AATACTCGCT GGAGCGTAAC GACGGCCCGT CCGCGCTGAT CTTCTCGCGT 
CAGAACCTGA CTCACCAGGC GCGCGAACAG CAGCAAATAG ATGCCATCGC TCGTGGTGGT 
TATGTATTGC GCGACTGCGC TGCAGAACCC GAGCTGATCC TGATCGCGAC CGGCTCTGAA 
GTCGGTCTGG CCGTTGAAGC CTACGAAAAG CTGACCGCTC AGGGTCGCAA CGTTCGTGTG 
GTTTCCATGC CATGCACCAG CGTGTTCGAA GCGCAGGACG CGGGCTACAA GCAAGCCGTT 
CTGCCGCTTC AGGTCAGCGC ACGTATCGCC ATCGAAGCGG CCCATGCCGA CTACTGGTAC 
AAATACGTGG GCCTGGAAGG CCGCGTGATC GGCATGACCA CCTTCGGCGA GTCGGCGCCT 
GCGCCGCTGC TGTTCGAAGA GTTCGGCTTC ACGCTGGAAA ACGTCCTGAG CATTGCTGAA 
GAGCTGCTGG AAGACTGA 

 

Protein sequence

MPSRRERANA IRALSMDAVQ KANSGHPGAP MGMADIAEVL WRDYLKHNPT NPSFADRDRF 
IMSNGHGSML VYSLLHLTGY DLSIDDLKNF RQLHSRTPGH PEFGYTPGVE TTTGPLGQGF 
ANAVGFAAAE KTLAAQFNRP GHSIVDHHTY VFMGDGCMME GISHEVASLA GTLQLGKLIA 
FYDDNGISID GEVEGWFTDD TPKRFEAYGW QVIRNVDGHD ADEIKTAIDT ARKSDQPTLI 
CCKTTIGFGS PNKQGKEESH GAPLGADEIA LTRAALKWNH GPFEIPADIY AEWNAKEKGL 
AVEAEWDQRF AAYSAAFPEL ANEFIRRMSG ELPADFAEKS AAYVAEVNAK GETIASRKAS 
QNALSALGPL LPEILGGSAD LAGSNLTIWK GCKSITGEDP NGNYLHYGVR EFGMAAMMNG 
IALHGGFVPY GATFLIFMEY ARNAVRMASL MKKRVIYVFT HDSIGLGEDG PTHQPIEQLT 
SLRTTPNLDT WRPADAVESA VAWKYSLERN DGPSALIFSR QNLTHQAREQ QQIDAIARGG 
YVLRDCAAEP ELILIATGSE VGLAVEAYEK LTAQGRNVRV VSMPCTSVFE AQDAGYKQAV 
LPLQVSARIA IEAAHADYWY KYVGLEGRVI GMTTFGESAP APLLFEEFGF TLENVLSIAE 
ELLED