Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0380 |
Symbol | |
ID | 1181989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 420719 |
End bp | 421120 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637391748 |
Product | hypothetical protein |
Protein accession | NP_790229 |
Protein GI | 28867610 |
COG category | [S] Function unknown |
COG ID | [COG3686] Predicted membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGTTG CTTTCTGGTG CGTGCTGGTC GCGATATTGC TGCCGATTAT CTGTGCGGGC ATCGCCAAGT TCGGCAGCGG CAAATTTGGC AGCGGACACA ATCATGATCC GCGCGCCTTT CTCGACAAGC TGGAGGGTTT TCCGCGACGC GCGCACGCCG CGCAGCTCAA CAGCTTTGAA GTGACCCCTG CGTTTGCCGC CGCGGTGATC ATTGCGCACA TCGCGGGCAA TGCGCAGTTG GTCACCATTG ATGTACTGGC GGTGCTGTTT ATCACCAGCC GTCTGCTCTA CATCATTTTC TATCTGGCAG ACCTTGCGGC GTTGCGTTCG GTTGTCTGGC TGGCCGGCAT GGGCCTGATT ATCGCGCTGT TCGGGGTGTC GGCTTTCCCG GCGGTGTCCT GA
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Protein sequence | MTVAFWCVLV AILLPIICAG IAKFGSGKFG SGHNHDPRAF LDKLEGFPRR AHAAQLNSFE VTPAFAAAVI IAHIAGNAQL VTIDVLAVLF ITSRLLYIIF YLADLAALRS VVWLAGMGLI IALFGVSAFP AVS
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