Gene PSPTO_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0308 
Symbolsbp 
ID1181917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp335361 
End bp336377 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content56% 
IMG OID637391677 
Productsulfate-binding protein 
Protein accessionNP_790158 
Protein GI28867539 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1613] ABC-type sulfate transport system, periplasmic component 
TIGRFAM ID[TIGR00971] sulfate/thiosulfate-binding protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATTC GCCGTTTTGC TCTGGCCGCT CTCGCCAGTG CTGTTTTCGC AGGTTCGGCT 
GTTGCCAAGG ATTACGAACT GCTCAACGTG TCTTACGATC CGACACGCGA GTTGTATCAG
GATTACAACG CAGAATTCGT CAACTTCTGG AAAAAGTCCC ATCCGGACGA CACCGTGAAG
ATTAACCAGT CTCACGGCGG CTCGGGCAAG CAGGCGCGTG GCGTAATCGA CGGCCTGCGT
GCCGATGTGG TGACCCTGGC GCTGGCCGGT GACATTGACG AAATCGCCAA GCTCGGCAAA
ACCCTGCCTG AAAACTGGCA GACCCGACTG CCGGACGCGA GCACGCCGTA CACCTCGACC
ATCGTGTTTC TGGTGCGCAA GGGCAACCCC AAAGGCATCA AGGACTGGGG CGACCTGATC
AAGAAAGACG TTTCCGTAAT CACCCCCAAC CCGAAAACCT CCGGCGGGGC GCGCTGGAAC
TTTCTGGCGG CCTGGGCCTA CGGCCTGAAA GCGGGCGGCG GCGATGAAGC CAAAGCCAAA
GAATACGTGC AGACGTTGTT CAAGCACGTA CCGATTCTGG ACACCGGCGC TCGCGGCTCG
ACCATTACCT TCGTCAACAA CGGTCAGGGC GATGTGTTGC TGGCCTGGGA AAACGAAGCA
TTCCTGGCGC AGAACGAAGA CGGCGGCAAA GGCAAAGACA AGTTCGATAT TGTCGTACCT
TCGCTGTCGA TCCTTGCCGA ACCTCCGGTT GCCGTGGTCG ACAAAAACGC CGAGAAGAAG
GGCAACACTG AGATCGCGAC CGAGTACCTC AAGCACCTGT ACAGCAAGGA AGGTCAGGAA
ATTGCTGCAA AAAATTACTA TCGTCCACGC AATGCCGAAG TCGCTGCCAA ATACGAGAAG
CAATTCCCGA AACTTGACCT GGTGACTATC GACAAAGACT TTGGCGGCTG GAAGACTGCG
CAGCCGAAGT TTTTCAATGA TGGCGGCGTG TTCGACCAGA TTTACCAAGC GCAATAA
 
Protein sequence
MSIRRFALAA LASAVFAGSA VAKDYELLNV SYDPTRELYQ DYNAEFVNFW KKSHPDDTVK 
INQSHGGSGK QARGVIDGLR ADVVTLALAG DIDEIAKLGK TLPENWQTRL PDASTPYTST
IVFLVRKGNP KGIKDWGDLI KKDVSVITPN PKTSGGARWN FLAAWAYGLK AGGGDEAKAK
EYVQTLFKHV PILDTGARGS TITFVNNGQG DVLLAWENEA FLAQNEDGGK GKDKFDIVVP
SLSILAEPPV AVVDKNAEKK GNTEIATEYL KHLYSKEGQE IAAKNYYRPR NAEVAAKYEK
QFPKLDLVTI DKDFGGWKTA QPKFFNDGGV FDQIYQAQ