| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0265 |
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| Symbol | |
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| ID | 1181873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 288646 |
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| End bp | 289668 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637391634 |
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| Product | peptide ABC transporter, permease protein |
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| Protein accession | NP_790116 |
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| Protein GI | 28867497 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGAGT TCTCTCCCCA GACCCAGCGT CGCTTCGCCC TGTTCAAGGC CAACCGGCGT
GGCTGGTGGT CGCTGTGGAT CTTCATCGGC CTGATGCTGG TGTGCCTGTG CGGCGAGCTG
ATCGCCAACG ACAAACCGTT ACTGATCAAC TACGACGGGC AGATGTATTA CCCGGTGTTG
CACACCTACA TGGAAACCGA TTTCGGCGGC GAGCTGCCGT TTGAGCCGGA CTATGCCAGC
GACTACGTGC GCAAGCTGAT CGCCGCCAAG AATGGCTGGA TGCTCTTCGC GCCGATCCCG
TTCAGCTACG ACACCATCAA CTATGACCTG GACGCGCCAT CGCCCAGCCC GCCCGACGGC
ACCAACTGGC TGGGCACTGA TGAGCAGGCC CGCGATGTGC TGGCGCGGGT GCTGTTCGGT
GCGCGGATTT CCATCCTGTT CGCGCTGCTG CTGACCGTGA TCAGCACGGT AATTGGTGTC
TGCGCCGGGG CCATTCAGGG CTATTACGGC GGCATGACCG ACCTGATCGG CCAGCGGATT
CAAGAGATCT GGTCGGGTTT GCCGGTGCTG TACCTGCTGA TCATTCTGTC CGGCTTTGTA
TCACCGAGTT TCTGGTGGTT GCTGGGCATC ATGGCGCTGT TTTCCTGGCT GTCGCTGGTG
GACGTGGTGC GTGCCGAGTT TCTGCGCGGG CGCAATCTGG AATACGTGAA AGCCGCCCGC
GCACTGGGCC TGACCGATGC TGCGCTGATG TGGCGGCACA TCCTGCCCAA CGCAATGACC
AGCACCCTGA CCTACCTGCC GTTCATCATC ACCGGCGCCA TTGCCACGCT CACCGCACTG
GATTTTCTCG GCTTCGGCAT GCCGGCGGGC AGCGCTTCGC TGGGTGAACT GATCGGTGAA
GCCAAGCGCA ACCTGCAAGC GCCCTGGCTG GGGCTGACCG CGTTCGTGGC GCTGGCCTTG
ATCCTTTCGT TGCTGGTGTT CATCGGCGAA GCCTGCCGCG ACGCTTTTGA TCCTCGGAGC
TGA
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| Protein sequence | MFEFSPQTQR RFALFKANRR GWWSLWIFIG LMLVCLCGEL IANDKPLLIN YDGQMYYPVL
HTYMETDFGG ELPFEPDYAS DYVRKLIAAK NGWMLFAPIP FSYDTINYDL DAPSPSPPDG
TNWLGTDEQA RDVLARVLFG ARISILFALL LTVISTVIGV CAGAIQGYYG GMTDLIGQRI
QEIWSGLPVL YLLIILSGFV SPSFWWLLGI MALFSWLSLV DVVRAEFLRG RNLEYVKAAR
ALGLTDAALM WRHILPNAMT STLTYLPFII TGAIATLTAL DFLGFGMPAG SASLGELIGE
AKRNLQAPWL GLTAFVALAL ILSLLVFIGE ACRDAFDPRS
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