Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0251 |
Symbol | |
ID | 1181859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 272272 |
End bp | 273150 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637391620 |
Product | peptide ABC transporter, permease protein |
Protein accession | NP_790102 |
Protein GI | 28867483 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCAAT TCATTGCGAA ATCGACGCCT GCCGCGCCGG AACCGGTGCT GCGCAAAAAA GCGTCCCGCC CGACTTCCTG GCTGGGCCTG CTGGGCGCAA CGGTGTGCTT TCTCTGGCTG ATGGTCGCGT TGTTCGGCCC TTGGCTTGCG CCGCACCCGG TTGGCGAAGT GGTGTCCGAC AACATGTTTG AAAACATGAG CGCGGTCTAC CCGTTCGGCA CCGATTACCT GGGCCGCGAC ATGCTCAGCC GGGTGCTGGT CGGCGCAAAA TTTACGGTGG GCCTGGCGTT GATCTCGGCG GTACTGGCCA GTGGTATCGG CACCCTGTGT GCGCTGCTGT CGGTGGTTGC GCCGAAATGG CTGGATGAAA TCATCAGCCG CCTGATGGAC GCCTTTATCT CGATCCCGAG CAAGATGCTG GCGCTGATCA TGGTGTCGGC GTTCGGTTCG TCCGAAGTGC TGCTGATCTG TACGGCGGTG CTGAGCTACT CGCCGGGGGC GTTTCGTATC GCGCGCAGCC TGGCGGTGAA CATCGAGGCG CTGGAATACG TGCAAGTGGC GCGTACCCGT GGTGAAGGCC GCGTGTACAT CGCCTGCCGG GAGATTCTGC CGAACATGCT CAACCCGGTT CTGACCGACC TGGGCCTGCG TTTTGGTTTC ATCGTGTTGC TGCTCAGCGG CATGAGTTTT CTCGGGCTCG GTGTGCAACC CCCCGATGCC GACCTCGGTT CGCTGGTGCG GGAAAACATC GGCGGGCTCA GCCAGGGCGC GCCAGCCATC GTGATTCCGG CGCTGGCGAT CGGCACGCTG ACCATCGGCG TCAACCTGTT CATCGACCGG CTGGCCTCAC GGCGCGGTCG TCGTTCGGGA GGGCATTGA
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Protein sequence | MTQFIAKSTP AAPEPVLRKK ASRPTSWLGL LGATVCFLWL MVALFGPWLA PHPVGEVVSD NMFENMSAVY PFGTDYLGRD MLSRVLVGAK FTVGLALISA VLASGIGTLC ALLSVVAPKW LDEIISRLMD AFISIPSKML ALIMVSAFGS SEVLLICTAV LSYSPGAFRI ARSLAVNIEA LEYVQVARTR GEGRVYIACR EILPNMLNPV LTDLGLRFGF IVLLLSGMSF LGLGVQPPDA DLGSLVRENI GGLSQGAPAI VIPALAIGTL TIGVNLFIDR LASRRGRRSG GH
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