| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0250 |
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| Symbol | |
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| ID | 1181858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 271319 |
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| End bp | 272275 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391619 |
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| Product | peptide ABC transporter, permease protein |
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| Protein accession | NP_790101 |
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| Protein GI | 28867482 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGCA ACACACTCTG GTTGATCGTA CAGCGCCTGG GCGCGGCGAT CGTGACGTTG
TTGATCGTTT CCATCGTGGT ATTCGCCATT ACGGCGGTAC TGCCTGGTGA CGCGGCACAA
CAGGCTCTTG GGCAATTCGC GACCCCTGAA CAGGTCGCGG CATTGCGTAT AAAACTGGGC
CTGGACCAAC CCGGTGTGGT GCGTTATCTG CATTGGCTGA CGAACCTGCT CGGTGGCAAC
TTCGGCGAAT CGGTGTCCAA TGCGATGCCG GTTTCCGAGC TGATTGCCGG ACGCTTTCCG
AAAACCCTGA TGCTGGCCGC GACCACCGCG CTGGTCTCGG TACCGGTCGC CCTGACACTG
GGTATCGGCG CGGCGATGGG TCGTGGTGGT CGTCTCGATG GCGCGCTGAA CTTCATCACG
CTGTCGCTGG TGGCCGTTCC CGAATTTCTC GTGGCGACGC TGGCCGTGCT GATATTTGCC
GTCAACCTGG GCTGGCTGTC GGCGTTGTCC TACGGCTCTG ATGTCACCTC GCCGTGGCAG
TTCATGCGCA CCTACGCGTT GCCGGTGATG ACCCTGTGCT GCGTGATCGT GGCGCAGATG
GCGCGCATGA CCCGCGCCGC AGTCATCGAC CAACTGGACA GCCCATATGT GGAAATGGCC
CGCCTCAAAG GCGTCAGCCC GGTGCGCATC GTATTGCGTC ACGCCTTGCC CAATGCCATC
GGGCCGATCG TCAACGCCGT GGCGCTGAGC CTTTCGTACC TGCTGGGCGG TGTGGTCATC
GTTGAAACCA TCTTCAACTA TCCCGGCATC GCCAGTCTGA TGGTTGACGC GGTCACCAAC
CGCGACATGG CGCTGGTGCA GGGCTGCACC ATGCTGTTCT GCGCCGCTTA TCTTGGGTTG
GTGCTGATGG CCGACCTGTG TGCAATTCTT TCCAATCCGA GGCTGAGAAC CCAATGA
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| Protein sequence | MNSNTLWLIV QRLGAAIVTL LIVSIVVFAI TAVLPGDAAQ QALGQFATPE QVAALRIKLG
LDQPGVVRYL HWLTNLLGGN FGESVSNAMP VSELIAGRFP KTLMLAATTA LVSVPVALTL
GIGAAMGRGG RLDGALNFIT LSLVAVPEFL VATLAVLIFA VNLGWLSALS YGSDVTSPWQ
FMRTYALPVM TLCCVIVAQM ARMTRAAVID QLDSPYVEMA RLKGVSPVRI VLRHALPNAI
GPIVNAVALS LSYLLGGVVI VETIFNYPGI ASLMVDAVTN RDMALVQGCT MLFCAAYLGL
VLMADLCAIL SNPRLRTQ
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