Gene PSPTO_0206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0206 
Symbol 
ID1181814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp232469 
End bp232945 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content55% 
IMG OID637391576 
Producthypothetical protein 
Protein accessionNP_790058 
Protein GI28867439 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0880357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGTTT CCGCCACCAC ACGTAACGTC GAGCCCGCAG CGCCCGCCCG CAGGCCAACG 
GAATATCTGC TCAGGACCGA TGCAGGTCAG CTCAGTCAGG TCATGGTCTA CAAGCTGACC
GTTAAAGGCT TTGAACTGAA AGACGTACAA GACATGCTTT CGATCTCTGA TCTTTATTCG
ACGAATAAAA TCATGAGCCG CATCGTGGGC AAGTCCGTAA GGACAATCCA GCGGCAGGGC
AGCAGCAAGC AGCCTGCACA CCTCAACTCA CAACAAAGCG CTGTGGCGTT CCAGTACGCA
AAGGTTCTGG AACACGCCAC CCATGTGTTC GGTAATCAGA AGCTCGCAGA AGAGTGGCTC
GGGCGCCCTT GCAAATACCT GGACGGCGAC GTGCCGCTGG ACGTCATCGA CAATCCCATC
GGGTTTCAGA CAGTCGAAGA CTACCTGGAG CGTATCGAGT ACGGGGTCTA TCAGTGA
 
Protein sequence
MMVSATTRNV EPAAPARRPT EYLLRTDAGQ LSQVMVYKLT VKGFELKDVQ DMLSISDLYS 
TNKIMSRIVG KSVRTIQRQG SSKQPAHLNS QQSAVAFQYA KVLEHATHVF GNQKLAEEWL
GRPCKYLDGD VPLDVIDNPI GFQTVEDYLE RIEYGVYQ