Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0206 |
Symbol | |
ID | 1181814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 232469 |
End bp | 232945 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637391576 |
Product | hypothetical protein |
Protein accession | NP_790058 |
Protein GI | 28867439 |
COG category | [S] Function unknown |
COG ID | [COG5642] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0880357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGTTT CCGCCACCAC ACGTAACGTC GAGCCCGCAG CGCCCGCCCG CAGGCCAACG GAATATCTGC TCAGGACCGA TGCAGGTCAG CTCAGTCAGG TCATGGTCTA CAAGCTGACC GTTAAAGGCT TTGAACTGAA AGACGTACAA GACATGCTTT CGATCTCTGA TCTTTATTCG ACGAATAAAA TCATGAGCCG CATCGTGGGC AAGTCCGTAA GGACAATCCA GCGGCAGGGC AGCAGCAAGC AGCCTGCACA CCTCAACTCA CAACAAAGCG CTGTGGCGTT CCAGTACGCA AAGGTTCTGG AACACGCCAC CCATGTGTTC GGTAATCAGA AGCTCGCAGA AGAGTGGCTC GGGCGCCCTT GCAAATACCT GGACGGCGAC GTGCCGCTGG ACGTCATCGA CAATCCCATC GGGTTTCAGA CAGTCGAAGA CTACCTGGAG CGTATCGAGT ACGGGGTCTA TCAGTGA
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Protein sequence | MMVSATTRNV EPAAPARRPT EYLLRTDAGQ LSQVMVYKLT VKGFELKDVQ DMLSISDLYS TNKIMSRIVG KSVRTIQRQG SSKQPAHLNS QQSAVAFQYA KVLEHATHVF GNQKLAEEWL GRPCKYLDGD VPLDVIDNPI GFQTVEDYLE RIEYGVYQ
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