Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0147 |
Symbol | |
ID | 1181755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 170766 |
End bp | 171197 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637391524 |
Product | hypothetical protein |
Protein accession | NP_790006 |
Protein GI | 28867387 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAAA CACCCACTTC CGGCCGAGGT GATCTGCCCC GCGCGCTGAT TTTCATCCCG CTGGGCCTGT GCCTGCTCTA CCTTACTGTT TGCCTGGTCG TTGACCGGAT TAACTTCCTG GCCCAGGCGC AACGCGCTGA AGGGCATGTC AGCGCCCTGA ATGCGGGCGG CAGCCACCCA CAAGTGGACT TCACCGATGC TGTGGGCAAA GCGGTCAGCT ACCCCCAAGG CGGCTTTATA TTCGGCTATT CGGTGGGCGA CCCGGTGACA GTGCTCTACC TCGGCGAAGC CCCCTCCAGC ACCGCGATCA TTGAAGACCA GGGCGCGCTA TGGGGCGTGA GCCTGCTGAC GGGCCTGTTC GCAATCGTGT TTACCGCAGG AGGCGGTTAC CACATGGCTG CATGGATTCG CAGGCGCCGG ATGGCACGGT GA
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Protein sequence | MTKTPTSGRG DLPRALIFIP LGLCLLYLTV CLVVDRINFL AQAQRAEGHV SALNAGGSHP QVDFTDAVGK AVSYPQGGFI FGYSVGDPVT VLYLGEAPSS TAIIEDQGAL WGVSLLTGLF AIVFTAGGGY HMAAWIRRRR MAR
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