Gene PSPTO_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0120 
Symbol 
ID1181728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp144451 
End bp145638 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content62% 
IMG OID637391497 
Producthypothetical protein 
Protein accessionNP_789979 
Protein GI28867360 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGATC TGAACCGCTT TGTGACACCC GTGCTCGACT TGATGCAGCG CTACCCGGGG 
CTCATTGCGG CGTTCGGTTT CGTGTCCGGT ATCGCCAGTT TCATTCTGGT CGACCGCCAG
GAAGCGCTGG CGACCTGGAT CGCCGTGGTG ATGCTGATCA GCTGGCTGTG GTTGATGGTC
GAAAACACCA TGGTCGGGTT GCTCAACAAG GCCTTGGGCC GCGAGATTCC GCAGGGCCTG
CTGCGCTACG GCACGCAGAT GATCCACCAG GAAAGTCTGT TTTTCGTACT GCCGTTCTTT
TTCATCACCA CCACCTGGAA CAGCGGTCAG GCGGTGTTCA CGGCGGCACT CGGGGCTGCC
GGGCTGATCT CGATCATCGA CCCCTTGTAC TACAAATGGC TGGCCCCCAA ACGCTGGCTG
TTCATGACGC TGCACACGCT GACCTTGTTT GCTGCACTGC TTACCGCGCT ACCGATCATT
CTGCACCTGA CCACCGCCGA GAGTTACAAA CTGGCGCTGG GCGTGGCGAT GCTGTTGTCG
GTCCCCAGCC TGATGTCGAC CTTCGCGCTC AATACCTGGC GTAACGCGCT GACGGTGATC
ACGATGATTC TGGCTATTGG CGCTGCGGGC TGGCTGCTGC GTTCGTGGGT ACCACCGGCG
ACTCTTTGGC TGACCGAAGT GGCCGTCAGC CCGGATTTCG ATAACAAGAA CCGGACGCCG
GGCGACAGCA TCTCGCTGAT CAGCGTCAAA CAACTGCGCA ATGGCGGTTT GTACGCCTAC
ACCGCCATCA ACGCGCCGCG TGGACTGGAC GAGCGCATCT ACCATGTGTG GTGGCACGAA
GGTAAGGAGA TGGACCGCAT TGCCCTGGAC ATCCACGGTG GGCGCAAGGA GGGCTATCGC
GCCTGGACCC GCAAGCAGAA CTTCCCGGAG GACGTGACAG GGCGCTGGCA GGTACGGGTA
TTGACCGAGG ACGGTCAGAT GATCGGCGTT CTGCGTTTCG TGGTGACCGA CAAAGATCAA
CCGGCCGTCA AGCGACCTAC CGGGCGGATC ATCAAACTCA AGCCGGGTGG CGACTCGAGC
GACGAAGCTG CGCCTGAATC GGCACCGGCG CAACCTCAGG CACCGGCACC GGCACCGGCA
CCGGCGCCTG CTGCGGCTGA GTCAGCGCCC GCAGCTCCGG CTCAGTGA
 
Protein sequence
MRDLNRFVTP VLDLMQRYPG LIAAFGFVSG IASFILVDRQ EALATWIAVV MLISWLWLMV 
ENTMVGLLNK ALGREIPQGL LRYGTQMIHQ ESLFFVLPFF FITTTWNSGQ AVFTAALGAA
GLISIIDPLY YKWLAPKRWL FMTLHTLTLF AALLTALPII LHLTTAESYK LALGVAMLLS
VPSLMSTFAL NTWRNALTVI TMILAIGAAG WLLRSWVPPA TLWLTEVAVS PDFDNKNRTP
GDSISLISVK QLRNGGLYAY TAINAPRGLD ERIYHVWWHE GKEMDRIALD IHGGRKEGYR
AWTRKQNFPE DVTGRWQVRV LTEDGQMIGV LRFVVTDKDQ PAVKRPTGRI IKLKPGGDSS
DEAAPESAPA QPQAPAPAPA PAPAAAESAP AAPAQ