Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0120 |
Symbol | |
ID | 1181728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 144451 |
End bp | 145638 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637391497 |
Product | hypothetical protein |
Protein accession | NP_789979 |
Protein GI | 28867360 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGATC TGAACCGCTT TGTGACACCC GTGCTCGACT TGATGCAGCG CTACCCGGGG CTCATTGCGG CGTTCGGTTT CGTGTCCGGT ATCGCCAGTT TCATTCTGGT CGACCGCCAG GAAGCGCTGG CGACCTGGAT CGCCGTGGTG ATGCTGATCA GCTGGCTGTG GTTGATGGTC GAAAACACCA TGGTCGGGTT GCTCAACAAG GCCTTGGGCC GCGAGATTCC GCAGGGCCTG CTGCGCTACG GCACGCAGAT GATCCACCAG GAAAGTCTGT TTTTCGTACT GCCGTTCTTT TTCATCACCA CCACCTGGAA CAGCGGTCAG GCGGTGTTCA CGGCGGCACT CGGGGCTGCC GGGCTGATCT CGATCATCGA CCCCTTGTAC TACAAATGGC TGGCCCCCAA ACGCTGGCTG TTCATGACGC TGCACACGCT GACCTTGTTT GCTGCACTGC TTACCGCGCT ACCGATCATT CTGCACCTGA CCACCGCCGA GAGTTACAAA CTGGCGCTGG GCGTGGCGAT GCTGTTGTCG GTCCCCAGCC TGATGTCGAC CTTCGCGCTC AATACCTGGC GTAACGCGCT GACGGTGATC ACGATGATTC TGGCTATTGG CGCTGCGGGC TGGCTGCTGC GTTCGTGGGT ACCACCGGCG ACTCTTTGGC TGACCGAAGT GGCCGTCAGC CCGGATTTCG ATAACAAGAA CCGGACGCCG GGCGACAGCA TCTCGCTGAT CAGCGTCAAA CAACTGCGCA ATGGCGGTTT GTACGCCTAC ACCGCCATCA ACGCGCCGCG TGGACTGGAC GAGCGCATCT ACCATGTGTG GTGGCACGAA GGTAAGGAGA TGGACCGCAT TGCCCTGGAC ATCCACGGTG GGCGCAAGGA GGGCTATCGC GCCTGGACCC GCAAGCAGAA CTTCCCGGAG GACGTGACAG GGCGCTGGCA GGTACGGGTA TTGACCGAGG ACGGTCAGAT GATCGGCGTT CTGCGTTTCG TGGTGACCGA CAAAGATCAA CCGGCCGTCA AGCGACCTAC CGGGCGGATC ATCAAACTCA AGCCGGGTGG CGACTCGAGC GACGAAGCTG CGCCTGAATC GGCACCGGCG CAACCTCAGG CACCGGCACC GGCACCGGCA CCGGCGCCTG CTGCGGCTGA GTCAGCGCCC GCAGCTCCGG CTCAGTGA
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Protein sequence | MRDLNRFVTP VLDLMQRYPG LIAAFGFVSG IASFILVDRQ EALATWIAVV MLISWLWLMV ENTMVGLLNK ALGREIPQGL LRYGTQMIHQ ESLFFVLPFF FITTTWNSGQ AVFTAALGAA GLISIIDPLY YKWLAPKRWL FMTLHTLTLF AALLTALPII LHLTTAESYK LALGVAMLLS VPSLMSTFAL NTWRNALTVI TMILAIGAAG WLLRSWVPPA TLWLTEVAVS PDFDNKNRTP GDSISLISVK QLRNGGLYAY TAINAPRGLD ERIYHVWWHE GKEMDRIALD IHGGRKEGYR AWTRKQNFPE DVTGRWQVRV LTEDGQMIGV LRFVVTDKDQ PAVKRPTGRI IKLKPGGDSS DEAAPESAPA QPQAPAPAPA PAPAAAESAP AAPAQ
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