Gene PSPTOA0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTOA0007 
Symbol 
ID1187314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004633 
Strand
Start bp7782 
End bp8255 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content51% 
IMG OID637408342 
Producthypothetical protein 
Protein accessionNP_808667 
Protein GI29171483 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCAAA ATCAGCGCAA AGATTGGATA ATTTCAACGA AAAAGGATAA CCAAATGGAT 
AGAAATCAAA ATCGCGGAGC TGAAATACTT GCACTTACCT TGGGCCTTGC CATGGTCTGT
TACGTTGTTG CCAAGGCGTT TTCAGACTAC CTGGGCGTGG ACATCACAGC CGGGGGGCGG
GTACTTTTAG CGCTTTTAAT GGCCCTGGGT ATGATTGGCT ATGCAGTCTG GAGCGAGCTG
ACAAATGGGT TCCTCGGCTT CAGGGCACTT TTACCGTTGG CATTTTCCAC TCTCTGGAGC
GGTATGTGGC CAGCCATGCA GTATTGGGGC ACCAAGTCGC TGTATTTCCC CGGCCTGCCT
AGTGAGTATC AAGACTTGGA ATGGTGGGCA AATGGATATA CTCAGTGGGG TGGATGGGCT
CTCATCCTGT TCGGCGGATA TGGCATTGCA TATTTCACCT GGCGGGCTAG GTAA
 
Protein sequence
MNQNQRKDWI ISTKKDNQMD RNQNRGAEIL ALTLGLAMVC YVVAKAFSDY LGVDITAGGR 
VLLALLMALG MIGYAVWSEL TNGFLGFRAL LPLAFSTLWS GMWPAMQYWG TKSLYFPGLP
SEYQDLEWWA NGYTQWGGWA LILFGGYGIA YFTWRAR