| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_6161 |
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| Symbol | choV |
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| ID | 5354202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 6367276 |
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| End bp | 6368454 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640815205 |
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| Product | choline ABC transporter ATP-binding protein |
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| Protein accession | YP_001351472 |
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| Protein GI | 152984276 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit
[TIGR03415] choline ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCGA TCCGATTCGA CCACGTGGAC GTCATCTTCG GCACCCACAC CAAGGAAGCC
CTGAAGCTCC TCGACCAGGG CCTCGGCCGC GCCGAGATCC TCAAGCGCAC CGGCCAGGTG
CTCGGCGTCG AGGACGCCTG CCTGGACGTC AACCGCGGCG AGATCTGCGT GCTGATGGGG
CTTTCCGGCT CCGGCAAGTC GAGCCTGCTG CGCTGCATCA ACGGCCTGAA CAAGGTCAGC
CGCGGCAAGC TGCTGATCGA GCACGAAGGT TCGCAGGTGG ACATCGCCAA CTGCTCGCCG
GCGACCCTCA AGGCGATGCG CACCAAGCGC ATCGCCATGG TGTTCCAGAA GTTCGCCCTG
ATGCCCTGGC TGACGGTGGC CGAGAACGTC GGTTTCGGCC TGGAGATGCA GGGCCGCCCG
GCCGCCGAGC GGAAGAAACT GATCGACGAG AAGCTCGAGC TGGTCGGCCT CTCGCAGTGG
CGCGACAAGC GTCCCGACTC GCTCTCCGGC GGCATGCAGC AGCGCGTCGG CCTGGCCCGC
GCGCTGGCGA TGGACGGCGA CATCCTGCTG ATGGATGAAC CCTTCTCCGC CCTCGACCCG
CTGATCCGCC AGCAATTGCA GGATGAACTG CTGGTGCTGC AACGGCAACT GCACAAGACC
ATCGTGTTCG TCAGCCACGA CCTCGACGAG GCGCTGAAGA TCGGCACCCG CATCGCGATC
ATGAAGGACG GCCGGATCAT CCAGCACGGC AGGCCGGAAG AGATCGTGCT GAGCCCGGCG
GACGACTACG TGCGTACCTT CGTCGCCCAT ACCAACCCGC TCAACGTGCT GTGCGGGCAG
AGCCTGATGC GTGGCCTCGA CCAGTGCATC CGGCAGAACG ACGAGATCTG CTTCGACCAG
GGCCGCGACT GCTGGATCGG CCTGAGCGAA GGCGACGTGC TCAAGGGCGC GCGCCAGGGC
GGCAACGTCA TCGACCTGCA ACGCTGGCGC CAGGGCGACC CGGTGGAGAA GCTGCGCCGC
GAACCGACCC TGGTGGATGT CAGCATCCGC ATGCGCGATG CCTTGCAGAT CCGCTACCAG
ACCGGCCACA AGCTGGTCCT GCAGGAGCAG GACAGGGTGG TCGGGGTGCT CGGCGACAGC
GAGCTGTATC ACGCACTGCT GGGCAAGAAC CTCGGCTGA
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| Protein sequence | MTAIRFDHVD VIFGTHTKEA LKLLDQGLGR AEILKRTGQV LGVEDACLDV NRGEICVLMG
LSGSGKSSLL RCINGLNKVS RGKLLIEHEG SQVDIANCSP ATLKAMRTKR IAMVFQKFAL
MPWLTVAENV GFGLEMQGRP AAERKKLIDE KLELVGLSQW RDKRPDSLSG GMQQRVGLAR
ALAMDGDILL MDEPFSALDP LIRQQLQDEL LVLQRQLHKT IVFVSHDLDE ALKIGTRIAI
MKDGRIIQHG RPEEIVLSPA DDYVRTFVAH TNPLNVLCGQ SLMRGLDQCI RQNDEICFDQ
GRDCWIGLSE GDVLKGARQG GNVIDLQRWR QGDPVEKLRR EPTLVDVSIR MRDALQIRYQ
TGHKLVLQEQ DRVVGVLGDS ELYHALLGKN LG
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