Gene PSPA7_5901 details

Gene Information

• Locus tag: PSPA7_5901
• Symbol: rfbD
• ID: 5354463
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 6093772
• End bp: 6094680
• Gene Length: 909 bp
• Protein Length: 302 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640814946
• Product: dTDP-4-dehydrorhamnose reductase
• Protein accession: YP_001351218
• Protein GI: 152985433
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1091] dTDP-4-dehydrorhamnose reductase
• TIGRFAM ID: [TIGR01214] dTDP-4-dehydrorhamnose reductase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCGGA TCCTCCTCCT CGGCGCCAAC GGCCAGGTCG GCTGGGAGCT GCAGCGCGCC 
CTGGCGCCGC TGGGCGAACT GCTGGTCTGC GACCGCCGGC GCGCCGACCT CGCCGACCCC 
GAAGGCCTGG CGCGACTGGT TCGCGCCGAG CGGCCGCAGT TCATCGTCAA CGCCGGTGCC 
TATACCGCAG TGGACAAGGC CGAGAGCGAT GCCGACAACG CCCGCCTGAT CAATGCCCGC 
GCCGTCGCGG TGCTGGCCGA GGAGGCCGCG GCCTGCGGCG CCTGGCTGGT GCATTACTCC 
ACCGACTACG TGTTCGACGG CGCGGGCAGC GCGCCCTTCG CCGAGGACGC GCCGACCGGC 
CCGCTCAGCG TCTATGGACA GACCAAGCTG GAAGGCGAGC AGGCCATCCG CGCCAGTGGT 
TGCCGCCACC TGATCTTCCG CACCAGCTGG GTCTACGCCG CGCGCGGCGG GAATTTCGCC 
AGGACCATGC TGCGCCTGGC CGGGCAACGC GACGAACTCA AGGTCGTGGC CGACCAGTTC 
GGCGCACCGA CCAGCGCCGA ACTGATCGCC GACGTCACCG CCCAGGCCCT GCAGCGCCTG 
CGCTGGGACG CCGATCTGGC GACGCGGGCC AGCGGCACCT ACCACCTGGT CGCCAGCGGC 
GAGACCTCCT GGCACCTCTA TGCGCGCTTC GTCATCGAGC AGGCGCTGGA GCGGGGCTGG 
GAATTGAAGA CGGAGCCGCA GCGGGTCCTG CCCATCACCA CCGCCGACTA CCCGGTACCG 
GCGAAACGTC CGGCCAACTC GCGCCTGGAC AACCGCAAGC TGCAACAGGT CTTCGGCCTG 
GTGCTGCCCG ACTGGCGCTA CCATGCCGGA CGCATGATCC AGGAACTGAG CGAACAGGGA 
CCACTATGA 

 

Protein sequence

MNRILLLGAN GQVGWELQRA LAPLGELLVC DRRRADLADP EGLARLVRAE RPQFIVNAGA 
YTAVDKAESD ADNARLINAR AVAVLAEEAA ACGAWLVHYS TDYVFDGAGS APFAEDAPTG 
PLSVYGQTKL EGEQAIRASG CRHLIFRTSW VYAARGGNFA RTMLRLAGQR DELKVVADQF 
GAPTSAELIA DVTAQALQRL RWDADLATRA SGTYHLVASG ETSWHLYARF VIEQALERGW 
ELKTEPQRVL PITTADYPVP AKRPANSRLD NRKLQQVFGL VLPDWRYHAG RMIQELSEQG 
PL