| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5754 |
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| Symbol | |
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| ID | 5354068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 5933896 |
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| End bp | 5936595 |
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| Gene Length | 2700 bp |
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| Protein Length | 899 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640814799 |
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| Product | hypothetical protein |
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| Protein accession | YP_001351073 |
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| Protein GI | 152989344 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTC ATCCCGATGC CGCCAGCCGT TCGGCGGCCG AGGTTGTCAC GCAGCTCCCC
GTGCCATCGC GGCTCGGGCT GCTGCGTTTC GAGCGGCTGA ACGAGCCGAG CTGGGCCCTG
CTGTTCCTCG ATCCCGCCTG CGAGCGCCAG CTCGGCCTGC CGGCGACCAC GCTCTGCGCC
CTGCTCGATG CGCCCTACGC CAGCCTGATG GAGCCCCAGG CCCGCCACCA CCTGCACGAG
CGGATCCAGC AGCAACTGGT GCAACGCCCC TACTACCAGG TGGGCTACAA GCTGCACACG
CCCAACGGCG TGCTGCACGT GCTGGAATTC GGCGAACCGT TCAAGCAGCA CGGCCGCCAG
TTGCTGCACG GCTACCTGAT GGTCGACGAA CGACCGGCGC TCGCCGAGCA CAGCGACGAC
CTGCTCGACC TGGAGTCGCA GAACCTGCGC CTGAAGGCCT CCCTGGATCT CTACCAGCGT
TCCCAGGACG ACCACCTGCA GCACCTGTTG CGCTCGCGCA CCCAGCAGAA CCTGATCGTC
CGCCTGGCCC GCCACCGCTA CCTGTCCAGC GACCCGCTGC TGGAAGCCGC GCAACTGATC
ACCCAGGCCG CCTGCGAAGC CTACGGTACG GCGCGGGCCG GCATCTGGCG GTTGCACGAC
GACCAGCGCC TGGAAGCGGT GACCGTCTAC CGCCGCGACC TCGACCAGTA CGAGAAGCCC
CAGGGCATCG ACGCCAGCCG CTATCCCGCC TACCTCGAGG CGGTCAACGG CGGACGCGCC
ATCGACGCCC ATAACGCGCA GCGCGATCCG CGCACCCAGG AACTCTACAA GGACTACCTG
AAGCCGCTGG GGATCAACGC CCTGCTCGAC GCCACCATCC GCATCGGCGG CGAAGTGGTC
GGCGTACTCT GCCTGGAACA TGCCGGCGAG AACCGCATGT GGCAGAGCGA CGAGATCGCT
TTCGCCGGCG AGCTCGCCGA CCAGTACGCG CAGGTCCTGA TGAACCACGA GCGGCGCAAT
GTCTCCAGCG CCCTGCACCT GTTCCAGCGC GCGGTGGAAC AGAGCGCCAG CGCCTTCCTG
CTGATCGACC GCGACGGCGT GGTGGAATAC GTCAACCCCA GCTTCACCTC GATCACCCAG
TACAGCGCCG ACGAAGTACG CAATCGCCGC CTGTCCGAGC TGCCGGCGCT GGAGAACCTC
AGCGAACTGC TGTTCGACGC GCGCTCGGCG CTGACCCAGC AGAACAGCTG GCAGGGCGAG
TTCCGCAGCC GACGCAAGAA CCACGAGCCG TACTGGGGCC AGCTGTCGCT GTCGAAGGTC
TACGACGACC TCGGCGAGCT GACCCACTAC ATCGGCATCT ACGAAGACAT CACGCAGAAC
AAGCTGGCCC AGCAGCACAT CGAGAAACTC GCCTACCGCG ACAACCTCAC CGGCCTGGCC
AACCGGCACT ACTTCATCGG CGCCCTCGAG GAGCGCCTGG AAAGCAGTGG CGACCGTCCG
CTCAGCCTGC TGCTGGTGGA CATCGACAAT TTCAAGCGGA TCAACGACAG CCTCGGCCAC
CAGACCGGCG ACAAGCTGCT GGTCAGCCTG GCCCGACGCC TGCGCAGCTG CCTCGGCGAC
GGCGCCACCC TGGCGCGCTT CGCCAGCAAC GAATTCGCCG TGCTGCTCGA CGACACCGCG
GTGGAAAAGG GCGAAAGCAT CGCCGCGCAG GTCCTGCACA TGCTCGACAA GCCGCTGTTC
GTCGACAACC AGCTGATCAA CATCACCGGC TCCATCGGCC TGGCCAGCGC CCCGCAGCAC
GGCTGCGACC CGCAGACCCT GATGAAGTAC GCCGGCCTCG CGCTGCACAA GGCCAAGGCC
AACGGCAAGC ACCAGGTCCA GGTGTTCACC GAGGCGCTGA CCGCCGAGGC CAGCTACAAG
CTGTTCGTCG AGAGCAACCT GCGCCGCGCC CTGACGCAGA ACGAACTGGC GGTGCACTAC
CAGCCCAAGC TGTGCCTGCG CAGCGGCCAG TTGCTCGGCC TGGAAGCCCT GCTGCGCTGG
CAGCATCCGG AAAAAGGCAT GATCCGCCCG GACCGCTTCA TCAGCGTGGC CGAGGAAACC
GGGCTGATCG TGCCGATCGG CAAGTGGGTG ATCCGCGAAG CCTGCCGCCA GGCCCGCGAG
CTGGCCGAGG CCGGGCTGGG CGAGCTGCAG ATCGCCATCA ACCTGTCGCC CAAGCAGTTC
ACCGACCCGG ACCTGGTCGG CTCGATCGCG GCGATCCTCC ACGAAGAGAA CATCCCGGCC
AGCCAACTGG AGCTGGAGCT CACCGAAAGC CTGCTGCTGG ACGCCACCGA CGATACCCGC
CAGCAACTCG AGCGCCTGAA GAGCCTGGGC CTGACCCTGG CGATGGACGA CTTCGGCACC
GGCTACTCGT CGCTGAGCTA CCTGAAGAAA TTCCCCATCG ACGTGATCAA GATCGACCGC
AGCTTCATCA AGGACATCCC CGACAGCCAG GACGACATGG AAATCACCTC GGCGGTGATC
GCCATGGCTC ACAACCTCAA GCTCAAGGTG GTCGCCGAGG GAGTCGAGAG CGCCGAGCAA
CTGGCCTTCC TCCGGCGCAA CCGCTGCGAC ATCGGCCAGG GCTACCTGTT CGACCGGCCG
ATCCCCAGCG ACCTGCTCAA CACCAGCCTG CTGCGCTATC CCTGCCGTAC CCTGCACTGA
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| Protein sequence | MKSHPDAASR SAAEVVTQLP VPSRLGLLRF ERLNEPSWAL LFLDPACERQ LGLPATTLCA
LLDAPYASLM EPQARHHLHE RIQQQLVQRP YYQVGYKLHT PNGVLHVLEF GEPFKQHGRQ
LLHGYLMVDE RPALAEHSDD LLDLESQNLR LKASLDLYQR SQDDHLQHLL RSRTQQNLIV
RLARHRYLSS DPLLEAAQLI TQAACEAYGT ARAGIWRLHD DQRLEAVTVY RRDLDQYEKP
QGIDASRYPA YLEAVNGGRA IDAHNAQRDP RTQELYKDYL KPLGINALLD ATIRIGGEVV
GVLCLEHAGE NRMWQSDEIA FAGELADQYA QVLMNHERRN VSSALHLFQR AVEQSASAFL
LIDRDGVVEY VNPSFTSITQ YSADEVRNRR LSELPALENL SELLFDARSA LTQQNSWQGE
FRSRRKNHEP YWGQLSLSKV YDDLGELTHY IGIYEDITQN KLAQQHIEKL AYRDNLTGLA
NRHYFIGALE ERLESSGDRP LSLLLVDIDN FKRINDSLGH QTGDKLLVSL ARRLRSCLGD
GATLARFASN EFAVLLDDTA VEKGESIAAQ VLHMLDKPLF VDNQLINITG SIGLASAPQH
GCDPQTLMKY AGLALHKAKA NGKHQVQVFT EALTAEASYK LFVESNLRRA LTQNELAVHY
QPKLCLRSGQ LLGLEALLRW QHPEKGMIRP DRFISVAEET GLIVPIGKWV IREACRQARE
LAEAGLGELQ IAINLSPKQF TDPDLVGSIA AILHEENIPA SQLELELTES LLLDATDDTR
QQLERLKSLG LTLAMDDFGT GYSSLSYLKK FPIDVIKIDR SFIKDIPDSQ DDMEITSAVI
AMAHNLKLKV VAEGVESAEQ LAFLRRNRCD IGQGYLFDRP IPSDLLNTSL LRYPCRTLH
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