| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5715 |
|---|
| Symbol | |
|---|
| ID | 5358283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 5888144 |
|---|
| End bp | 5890396 |
|---|
| Gene Length | 2253 bp |
|---|
| Protein Length | 750 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640814760 |
|---|
| Product | putative two-component sensor |
|---|
| Protein accession | YP_001351034 |
|---|
| Protein GI | 152988149 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.901003 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGCC GCGGCGGAGT GTTGGCGCGG CGCCTGTTGT GGCGGGTGCT GCTGTTCAGC
CTGTGTTTCA CCGTCCTCGC CGGCGCCGTG CAGCTGTTCT TCGAATACCG CCGTGAAATG
CGCGAGATCG AGGCGCGCCT GGAACTGATC CGCAGCGGCT ACCTGGCCAG CTTCGAGCGC
AGCCTGTGGG ATCTCAACCA GGAGCAGTTG AACGTGCAGT TGCGCGGCCT CGGGGATTTC
CCCGACATCG CCCGTGTCAG CCTGCAAAGC GCCGACTTCA ACCTGTTGCA GGGCGACCAG
CGTCCACGCG GCATGCTGCG GGTCGAGCGC TTTCCCTTGA GCTACCAGCC GCCGGGGGGC
GAGCGTCGGC AACTGGGCGA GCTGGAGATC GCCATCGACC TGGCGGCGGT CTATCGCCGG
CTGGCCTCCG GCGGCCTGGC CAGCCTCTTG TGGATGGGCA GTTTCCTTTG CGGCCTGGCG
GTGGCTCTCA GTTGGCTGTT CCACAGCCTG GTCACCCGGC ACCTGTGGCG CATGTCCGAG
TTCGCCGGGC ATATCGCCGA AGGCGACCTG CAACAACCGC TGCGACTGGA CAAGGCGGAC
CGCGAACGCG ACGAGATCGA CGCCGTCGCC GCCGCCCTGG AAGACATGCG CCAGGCCCTG
CGCACCGATC GCCGCCGGCG CGATGCTGAC CGCGACGAGT TGCGCCGACA GGTCGAGCGA
CGCACCGCCA GCCTGCGCCG GGCGAAGGAC CAGGCGGAAG CCGCCGACCG CGCCAAGAGC
CGTTTCCTCG CGACCATGAG CCATGAGATC CGTACCCCGC TGAACGGCAT CCTGGGTATG
GCCGAGCTGC TGCGCGAGGC ATCGCTCGGC GAGCGTGACC GCCAGCGCCT GCGGGCACTG
GCGACAGCGG GGGAGGGACT GTTGGCGATC CTCAACGAGG TCCTCCACTT CGCCCGGCTG
GAGGAAGCGC CGGATGCGCC GGAAGCGGTG GATTTCTCCC TGCGGAGCCT GCTCGAGGAC
GTCCTCACCC TGCTCGAACC GCGGGCGCGG GAGAACGCCA CGCGGCTGGA CCTGTGGCTG
GACCCGCAGG TTCATGACGG CCATCGCGGC GCCGAGCAGT TCCTGCGCCA GGTGTTGACC
AACCTGCTGG GCAACGCGGT GAAGTTCACC GAGGCCGGCG AGGTGCGCGT TCGCGTCGAG
CGGCTGGCGC GCAACGCAGG AGGCGAGCGA CTGCGGCTGA GCGTCGCGGA CGATGGAATC
GGCATTCCCG AGGAAATGCA CGAGCGCATC TTCGAGCGCT TCACCCAGGG CGGCGACGCC
GTGACCCGCC GTTACGGCGG AACCGGCCTG GGCCTGGCGA TCAGCAAGCG GCTGGTGGAA
GCGCTGGGCG GGCGGATCGG CGTGGAGAGT CAGGTCGGCC AGGGCAGCAC CTTCTGGTTC
GAGATCGAGC TGGCGCTGGC GAGCTTGCCC GGCGCGACGC CGCCGGCGGC ATCGGTGTCC
GCGCTGGAGG TGCTGCTGGT GGAGGACGTG GCGCTCAACC GCGAGGTGGC CCAGGGCCTG
CTCGAGCGGG ACGGCCACCG GGTGATGCTG GCCGAGGACG CGGGGCCGGC CCTGGCGCTG
TGCCGGCAGC GGCGCTTCGA CCTGATCCTG CTGGACATGC ACCTGCCGGG GATGGCTGGC
CTCGAGCTTT GCGCCGGGAT TCGCCGACAA CTCGACGGCC TGAACCGCGT CACACCGATC
TTCGCCTTCA CCGCCAGCAT CCAGCCGGAC ATGGTGCGTC GGTACTTCGC CGCGGGCATG
CAGGGCGTGC TCGGCAAGCC CCTGCGGATG GACGAGCTGC GCCGCGCGCT GGGCGAGGTC
GGCACCAGCG TGCCTGCGCT TGCGGCGGAC GCCGCGCTGG ACCGGCAAAT GCTCGAGACC
CACCGCCGCC TGCTGGGGCG GCACAAGCTC GCCGGACTGC TGGGCAACCT GCTGGGAAGC
CTGGACGAGC AGTTGCCGCT GCTGGCCGAA GCCCTGGACC AGGCGGACCT GGCCGAGGCG
GTGAACATCG CCCATCGCCT GTCCGGAAGC TGCCACTCCA TGGGCCTGGT GGCGCTCGGC
GCCGGCCTGG GCGAGCTGGA GCGCGAGGCC CTGGGCGCGG CCGGGGTCGA CCCGCGGGCC
TGGGGCGCAC GCCTGGGCCG CCTGCGCCGC GACGGCGCCG AGGCCCTGCG CCGCGCCGGC
TTCCTCGGCG AAGCCGACGC AGCGGCCGGT TGA
|
|---|
| Protein sequence | MSGRGGVLAR RLLWRVLLFS LCFTVLAGAV QLFFEYRREM REIEARLELI RSGYLASFER
SLWDLNQEQL NVQLRGLGDF PDIARVSLQS ADFNLLQGDQ RPRGMLRVER FPLSYQPPGG
ERRQLGELEI AIDLAAVYRR LASGGLASLL WMGSFLCGLA VALSWLFHSL VTRHLWRMSE
FAGHIAEGDL QQPLRLDKAD RERDEIDAVA AALEDMRQAL RTDRRRRDAD RDELRRQVER
RTASLRRAKD QAEAADRAKS RFLATMSHEI RTPLNGILGM AELLREASLG ERDRQRLRAL
ATAGEGLLAI LNEVLHFARL EEAPDAPEAV DFSLRSLLED VLTLLEPRAR ENATRLDLWL
DPQVHDGHRG AEQFLRQVLT NLLGNAVKFT EAGEVRVRVE RLARNAGGER LRLSVADDGI
GIPEEMHERI FERFTQGGDA VTRRYGGTGL GLAISKRLVE ALGGRIGVES QVGQGSTFWF
EIELALASLP GATPPAASVS ALEVLLVEDV ALNREVAQGL LERDGHRVML AEDAGPALAL
CRQRRFDLIL LDMHLPGMAG LELCAGIRRQ LDGLNRVTPI FAFTASIQPD MVRRYFAAGM
QGVLGKPLRM DELRRALGEV GTSVPALAAD AALDRQMLET HRRLLGRHKL AGLLGNLLGS
LDEQLPLLAE ALDQADLAEA VNIAHRLSGS CHSMGLVALG AGLGELEREA LGAAGVDPRA
WGARLGRLRR DGAEALRRAG FLGEADAAAG
|
|---|
| |