| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5684 |
|---|
| Symbol | |
|---|
| ID | 5355893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 5849192 |
|---|
| End bp | 5850703 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640814729 |
|---|
| Product | HDOD domain-contain protein |
|---|
| Protein accession | YP_001351003 |
|---|
| Protein GI | 152985071 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACC GCCTCGCCGC CTGGCTCGAA GAACTCGACC GGCAACCCCT GCCGATCCCC
GCCAGCCAGT ACGCCAGCCT GCATGCCGCG CTGAGCGACA GCCGCCGTTC GCTGCGCGAT
ATCGCCGACC AGTTGCAGGG CAGCCCGACC CTGGCGCTGT CCATCCTGCG CGAGGCCAAC
CGCGCCGAAA GCGCCCGCGA CAATCCGGCG GAAAGCCTGG AGGTCGCCCT CAGTCGCCTG
GGACTGGCGC GCGCGAGCCA ACTTCTGAAG ACCCTGCCGA GCATCCAGGA TGCCGACATG
CCCCGCGTCC TCGCACAGAT GCTGCTGATC AGCCAGCACG CCATGCAACA GGCCAGCGGC
CTGTTCGGCG CGCGCCTGGC CCGACTCTGG CAGGAAATCC ACTGGGGCAG CCTGCTGACC
ATGGCGCCGG TCTGGGCCCT GGCCAACGCC CGACCGCAAC TGCTGGAGCA GTGGCAGCAG
CGCGTGCTGG TACAGGGCGA ACCGACCTTG CGGGTGGAGC GCGAACTGCT CGGCATGCGC
CTGCTGCCGA TCTGCCTGGC GCTGGCCGAG CGCTGGCGGT TGCCGCAGTG GGTGATCCAG
GGCTATCGCC TGCTGGCCTG CGACCGGCGC CTGCTGGTCC GGGCCCTGCG CATCGCCCGC
GACCACCAGT CGCCCCTGCT CCAGCAACAG CAACTCGATG CCCAGCCCGA TCTCGCCCGC
TGGCTGACCC AGCCGGCCAA CTGCACTCTC CTCGCCAACG GCCTGGCCAT CGCCGCGCAC
CAGAGCTGGG ACGGGCCGCA CATGCTGCGC TGGCAGCGCC TGACCGGCCT TTACCTGGGC
CAGCCGCTGA CCGAAGTCCA GCAGCAGGTG CACATGCTCG CCGCGCAGAG CGCGCGCCTG
CACGCCCGGC CGCCGCTGTG GCATCCGGCG GTGGCCTTGA TCTGGCCCTG GCAGACGCGC
CGCTGGCGGG CCGAGGCGGC ACCGCCGCCG CCGCCCTCGG CGGAAGCCCT GGCCGAATGG
CGCAGGCACT GCGCCGAGCT GCTGCGCGAA CCGAGTCCCT TCAGCAACAT GGTGCAGTTC
ACCGCCTGCG CCCGCGATGC GCTGCGCGCC TGCGGCCTGC AACGGGTGAT GCTGCTGGTC
GCCGACCGTA CCCAGATGCA TCTGCAGGCG CAGCAGACCT CCGGCCTCGA ACCCGGCCAG
GAGAAATTGC AACTGGAGAT TGCCGGCAGC CCGCTGCTGC AGAAGCTGTT CCAGCAACCG
GCCCTGCTGC GCATCGGCCC GAACAACCAG GATCAATTGC TGCCGGCCCT CCCCGAGCCG
CTGCGCCAGC GGTTCCCCGG TCCACACCTG CTGCTGCGCT CGCTGGGCAA CGGTACGCGG
GTGGTGATGC TGCTCCTCGC CGACCTCGCC GGCCAGCCAT TCAGCGACCT TCACGCCCAG
GCCTTCGCCA AGACCGCCCA ATGCACCGAG CGCGCGGTCC AGCAGTTCGG CCGCCAGCGT
CGGACGGAAT GA
|
|---|
| Protein sequence | MTDRLAAWLE ELDRQPLPIP ASQYASLHAA LSDSRRSLRD IADQLQGSPT LALSILREAN
RAESARDNPA ESLEVALSRL GLARASQLLK TLPSIQDADM PRVLAQMLLI SQHAMQQASG
LFGARLARLW QEIHWGSLLT MAPVWALANA RPQLLEQWQQ RVLVQGEPTL RVERELLGMR
LLPICLALAE RWRLPQWVIQ GYRLLACDRR LLVRALRIAR DHQSPLLQQQ QLDAQPDLAR
WLTQPANCTL LANGLAIAAH QSWDGPHMLR WQRLTGLYLG QPLTEVQQQV HMLAAQSARL
HARPPLWHPA VALIWPWQTR RWRAEAAPPP PPSAEALAEW RRHCAELLRE PSPFSNMVQF
TACARDALRA CGLQRVMLLV ADRTQMHLQA QQTSGLEPGQ EKLQLEIAGS PLLQKLFQQP
ALLRIGPNNQ DQLLPALPEP LRQRFPGPHL LLRSLGNGTR VVMLLLADLA GQPFSDLHAQ
AFAKTAQCTE RAVQQFGRQR RTE
|
|---|
| |