Gene PSPA7_5488 details

Gene Information

• Locus tag: PSPA7_5488
• Symbol: smpB
• ID: 5357767
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 5655845
• End bp: 5656324
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640814533
• Product: SsrA-binding protein
• Protein accession: YP_001350810
• Protein GI: 152988108
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAAGC AGAAGAAACA CCCTTCGGGG ACCATCGCGC AGAACAAGAA GGCTCTGCAC 
GACTACTTCA TCGAACAACG CTTCGAGGCG GGCGTCGCCC TGGCGGGCTG GGAAGTGAAA 
AGCCTGCGCG CCGGCAAGGC CCAGCTGGTC GACAGCTACG TGCTGCTCAA GGACGGCGAG 
GCCTGGCTGC TCGGCAGCCA CATCACGCCG CTGACGACCG CCAGCACGCA CGTGATCGCC 
GACCCGGTGC GCACGCGCAA GTTGCTGCTG CACAAGCGCG AACTGGGCAA GCTGTTCGGT 
GCCGTGCAAC AGAAGGGCTA CGCCTGCGTT GCCCTGTCGA TGTACTGGAA GAAGCACCTG 
GTCAAGTGCG AGATCGCCCT GGCCAAGGGC AAGAAGGACT TCGACAAGCG CCACACCGAG 
AAGGAGCGCG ACTCCGACCG GGAGATCCAG CGCGCCATGC GCCACGGCAA GGACGACTGA 

 

Protein sequence

MAKQKKHPSG TIAQNKKALH DYFIEQRFEA GVALAGWEVK SLRAGKAQLV DSYVLLKDGE 
AWLLGSHITP LTTASTHVIA DPVRTRKLLL HKRELGKLFG AVQQKGYACV ALSMYWKKHL 
VKCEIALAKG KKDFDKRHTE KERDSDREIQ RAMRHGKDD