Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5276 |
Symbol | |
ID | 5353631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 5438784 |
End bp | 5439773 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640814323 |
Product | 3-beta hydroxysteroid dehydrogenase/isomerase family protein |
Protein accession | YP_001350609 |
Protein GI | 152987152 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.313319 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAATACG CCGTACTCGG AGCCACCGGC CTGCTGGGAC ATCACGCCGC GCGCGCTATC AGGGCCGCCG GTCACGATCT GGTGCTGGTC CACCGTCCTT CTTCACAGAT CCAGCGTCTC GCCTATCTGG AGCCCGAGTG CCGGGTCGCC GAGATGCTCG ATCACGCCGG CCTGGAGCGC GCGCTGCGCG GCCTCGACGG AGTGATCTTC AGCGCCGGCT ACTATCCGTC GCGGCCACGC CGCTGGCAGG AGGAAGTGGC CAGCGCGCTG GGCCAGACCA ATCCGTTCTA CGCCGCCTGC CTGCAGGCGC GGGTGCCGCG CATCCTCTAT GTCGGCTCGG CCTACGCCAT GCCGCGCCAT CCGCAGGGCC TGCCGGGACA CGAGGGGCTG TTCTACGACA GCCTGCCGAG TGGCAAGAGT TCCTACGTGC TGTGCAAGTG GGCGCTCGAC GAGCAGGCCC GGGAGCAGGC GCGCAATGGC CTGCCGGTGG TGATCGGGAT TCCCGGAATG GTCCTCGGCG AACTGGACAT CGGCCCGACC ACCGGGCGCG TGATCACCGC CATCGGCAAT GGCGAGATGA CCCACTACGT CGCCGGCCAG CGCAACGTCA TCGACGCCGC CGAAGCCGGC CGCGGCCTGC TGATGGCCCT GGAGCGCGGG CGCATCGGCG AGCGCTACCT GCTGACCGGG CACAACCTGG AGATGGCCGA CCTGACCCGG CGCATCGCCG AACTGCTCGG CCAGCCGGCA CCGCAGCCGA TGTCGATGGC CATGGCTCGC GCCCTGGCCA CCCTCGGCCG CCTGCGCTAC CGGGTCAGCG GCCAGTTGCC GCTGCTCGAC GAGACCGCTA TCGAGGTGAT GGCCGGAGGG CAGTTCCTCG ATGGACGCAA GGCCCGCGAG GAACTCGGCT TCTTCTCCAC CACCGCCCTG GACGACACCC TGCTGCGCGC CATCGACTGG TTCCGCGACA ACGGCTATTT CAACACCTAG
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Protein sequence | MKYAVLGATG LLGHHAARAI RAAGHDLVLV HRPSSQIQRL AYLEPECRVA EMLDHAGLER ALRGLDGVIF SAGYYPSRPR RWQEEVASAL GQTNPFYAAC LQARVPRILY VGSAYAMPRH PQGLPGHEGL FYDSLPSGKS SYVLCKWALD EQAREQARNG LPVVIGIPGM VLGELDIGPT TGRVITAIGN GEMTHYVAGQ RNVIDAAEAG RGLLMALERG RIGERYLLTG HNLEMADLTR RIAELLGQPA PQPMSMAMAR ALATLGRLRY RVSGQLPLLD ETAIEVMAGG QFLDGRKARE ELGFFSTTAL DDTLLRAIDW FRDNGYFNT
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