Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5271 |
Symbol | |
ID | 5354948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 5426650 |
End bp | 5433465 |
Gene Length | 6816 bp |
Protein Length | 2271 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640814317 |
Product | hemagglutination activity domain-containing protein |
Protein accession | YP_001350603 |
Protein GI | 152984772 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATCTGGA AGGCATTTTT TTGGCACATA GGGCGCCATG TGAATTACTT CTCAGATTTT CGTCATTTAA CTGACGAAAT GAAGTGCTGG AAAACTGACG TGCGCCACGT AGATAGGGAG ATTTTCATGG TCCGTCCGGA TAACCAGCGC GACAAGCGCA CCACTTCGAA AGCCGGTAGG GAGGGTCGTT TCGTCCTCGC CGCCAGCAGC ACCCTGATGT TCGCCATCGC CAGTATCAAT GCGGCCATGG CGGCGCCCAC CGGTGCCCAG TTCAACCCCA ACGAGATCAA GATCAGCCAG CAGGGCAAGA CCACGCTGAT CGACCAGAGC ACCCAGCGCG CGATCATCAA CTGGAAGGGC TTCGACGTGT CCGCCGACGA AGCGGTGCGC TTCAACCAAC CCGGGGTGAC CTCGTCGACC CTGAACCGGG TCACCGCCGG CCAGGAAAGC GTGATCGCCG GGCGCATCTC GGCGCCCGGG CAGGTGATCA TCTACAACTC CAACGGCGTG GTATTCAGCG GCACGGCCAA GGTCGACGTC GGCTCCCTGA TCACCACCAC GGCGAACATC AGCGACGAAC ACTTCCGCCA GGGCAAGCTG ATCTTCGACC AGCCCGGCAA CCCCAATGCG CGGATCGTCA ACGACGGCAG CATCAGCGTC GCCGAGAAAG GCCTGGCGGC CTTCGTCGCG CCGTCGGTGG CCAACAACGG CGTGATCAAC GCGCGCCTCG GCACCGTGGC GATGGCCGCC GGCAACGCCG CCACCATCGA CCTCTACGGC GACGGCCTGG TGTCGATCGC GGTGACCGAC CCGGTCACCC GCAAGCCGCA GGATGCCCAG GCGCTGGTCA GCAACGGCGG GGCCATCCAG GCCGATGGCG GCAGCGTGCT GATCACCGCC GAGCAGGCCT CGCGGGTGGT CGATAACGCG GTCAACCTGT CCGGCGTGAT CCTCGCCCGC GGCACCGAGG TGCGCGAGGG CAGCGTGGCG CTGGTGAGCA AGTCCGGGGA CATCCAGGTC GCCGGCAAGA TCGACGTCAG CGGACCGAAG AATGGTGGCG ACGTGCTGGT CAGCGGCCAG CAGGTGGTCC TGGCGAGCAG CGCCAGCGTC GATGCGCGCG GCGCCGCCCA GGGTGGCAGC GTACGCATCG GCGGCGACTT CCAGGGCCGC GGCGAACTGC CCCGGGCGAA GAACACCACG CTGGACAAGG GCTCCAGCAT CGACGTTTCC GCAACCGGCA AGGGCAACGG CGGCCTCGCC GTGGTCTGGT CGGACGGCAA TACCCGCATG GACGGGCGGA TCCTCGCCCG GGGCGGTGCC CAGGGCGGCA ACGGCGGCCT GGTGGAAACC TCCGGCAAGG TCAACCTGAG CATCGCCGAC AGCGCCTACG TCAGCGTCGC GGCACCCTAC GGCAACGGCG GCACCTGGCT GCTCGACCCG ACCACCCTGC GCATCGTCGC CTCCGGCGGC ACCTCCGGCT CGGTCGGGGG AGCCAATGGC GCCAGCGGCA ACGCGACGGT CAATGCCTCG GTGGTCACCG GCGCGCTGGC CGGCGGCCGG GTTACCCTCA GCGCCAGCGA CCGGCTGTCG GTCGAGGCGC CGCTGATCAC CAACAACCTG GGCGGCGCCA GCCGTGGCCT GGAGCTGATC GCCACCGGCC CGGCCGGCGC GGTGGACATC TCCGCGCCGA TCCTGTTCCG CAACGGCAGC CTGGCGATCC GCGCCGGCGG CAATATCAAC TTCCTCAGCG GTGGCACCCC GCAGACCAGT GGCATCGTCG ACCTTGGCAG CGGCACCCTG TGGATGCAGA CCAGCACCAC CGGCAAGATC AGCCAGCAGG CCGGTACCGC GCTGATCGCC GCCAACCTGG CCGGTCGTGC CGGCAGCATC GATCTCGGTT CCTGGGACAA CTACGCCGGC AACCTGGCGC TGCAGACCTT CAATGGCGCG TTGAAGTACC GGCAGAGCAA CTCCACCGGT GTGACCACCA GCGGCACGGT GTTCGATCCG TTCATCGCCA GCCAGAGCAT GACCGGCACC GCGCAGAACA TCGTCTCCAG CGTCGGTACC CGGGTCCTCG AGGCCAACAG CAGAGGCACC ACCGGCAACT ACACCCTGAC CGCCGACGGC AACAGCGAGT TCGACCGCCT GGTCTTCACC GCGCTGCCCT ACCGCCGGGT CAGCGGCTCC GCCAGCTTCC CGACCAACGA CTCGTCGGAT TACCTGGTGA CCAACCTGCG CTACCGGGTC AACGGCAGCG ACGTCACGGC CACGCCGACC GGCGGCACGC CCAGCGGCTT CACCGTCGCC GCCGGCAACG GCAGCGTCAC CACCTGGGCC GGCAACTGGG GCACCAGTTG GGGCGTGAAG GGCTTCGGCG GGGTGATCGG GGTGACTGAC GAGTTGCAGT ACGACGTCGG CACCGGCCTG ACCGAGGAAC TGATCTTCGG CCTGGGCGGC AAGACCAGCC GCGTCGACAC CCGCCTCGAC CTGTTCATGC GCGAGGGGCC ATTCGGCAGC TTTGCCGAGC GCGCCCAGGT GGAAATGTTC AAGACCACTA CCACCGCTGG CGACATTCTC TCGCGCCAGC AGACCGCCAC CCTGACCGCC GGCGATGCCA GCCGCGTCTA CGGCGATGCC AACCCGGCGC TGACGGCGAC CATGTCCGGC ATCAATGCCA TCGATGCCTA TGTCAACAGC CAGTTCAACG ACCTCTACCA GGTGACCGCC AGCACCACTG CGACCCAGGC GTCGAACGTC GGGCAATACG CGATCACCGG CAATGCCAAC GGCAGCGAAT ACTTCAGCCA GCGCTACCAG CTGGTACGCC AGGACGGCAA GCTGACGGTC ACCCCGGCGC AACTGATCGT CAGCGCCGAC GCCAGGAGCA AGGTCTATGG CGACGCCGAT CCGAGCCTGA CCTATCAGGT CAGCGGTCTG AAGAACGGCG ACACCGCGGG TAGCGTGCTG ACCGGCAACC TGGGCCGGGT GGCCGGCGAG AACGTCGGCA ACTACGGGAT TCTCCAGGGC GGGCTGGGCC TCAATACCGC CAACTACACC CTGAGCTACG TCGGCAACGA CCTGCGCATC ACGCCGGCGC AACTGAACGT GATCGCCGAC GCCAAGACCA AGGTGTACGG CGACCTGGAT CCGACCCTCA CCTACCAGGT CTCCGGCCTG AAGCGCGGCG ATACCGCCGG CGCGGTGCTC AATGGCGGCA GCCTGAGTCG CGTGGCGGGC GAGAACGTCG GGGTCTATGG CATCAACCAG GGCGGCCTGG GCCTGGTCAG CAGCAACTAC ACGCTGAATT ACCAGGGCAA CGACCTGACC ATCACCAAGG CGCTGCTGAA CGTGATCGCC GACGCCAAGA CCAAGGTCTA CGGCGATGCC GACCCGAGCC TGACCTACCA GGTCAGCGGG CTGAAGAACG GCGATAGCGC CGGCGCGATC CTCACCGGCG GGCTGAACCG TGCCGCGGGC GAGAACGTGG GCGTGTACGG CATCAACCAG GGCGACCTGG CATTGAACAG CGGCAACTAC GACCTGGCCT ACCAGGGCAA TAACCTGACC ATCACCAAGG CGCTGCTGAA CGTGATCGCC GACGCCAAGA CCAAGGTCTA CGGCGACGCC GACCCGAGCC TGACCTACCA GGTCAGCGGG CTGAAGAACG GCGATAGCGC CGGCGCGATC CTCACCGGCG GGCTGAACCG TGCCGCGGGC GAGAACGTGG GCGTGTACGG CATCAACCAG GGCGACCTGG CATTGAACAG CGGCAACTAC GACCTGGCCT ACCAGGGCAA CAACCTGACC ATCACCAAGG CGCTGCTGAA CGTGATCGCC GACGCCAAGA CCAAGGTCTA CGGCGATGCC GACCCGAGCC TGACCTACCA GGTCAGCGGT CTGAAGAACG GCGACAGCGC CGGTTCGATC CTGACCGGCG GGCTGAACCG CGCCGCGGGC GAGAACGTGG GCGTGTACGG CATCAACCAG GGCGACCTGG CACTGAACAG CGGCAACTAC GACCTGAGCT ATCAGGGCAA TAACCTGACC ATCACCAAGG CGCTGCTGAA CGTGATCGCC GACGCCAAGA CCAAGGTCTA CGGCGACGCC GACCCGAGCC TGACCTATCA GGTCAGCGGC CTGAAGAACG GCGACAGCGC CGGCGCGATC CTGACCGGCG GGCTGAACCG CGCCGCGGGC GAGAACGTGG GCGTGTACGG CATCAACCAG GGCGACCTGG CACTGAACAG CGGCAACTAC GACCTGAGCT ATCAGGGCAA TAACCTGACC ATCACCAAGG CGCTGCTGAA CGTGATCGCC GACGCCAAGA CCAAGGTCTA CGGCGACGCC GACCCGAGCC TGACCTATCA GGTCAGCGGC CTGAAGAACG GCGACAGCGC CGGCGCGATC CTCACCGGCG GGCTGAACCG TGCCGCGGGC GAGAACGTGG GCGTGTACGG CATCAACCAG GGCGACCTGG CATTGAACAG CGGCAACTAC GACCTGGCCT ACCAGGGCAA CAACCTGACC ATCACCAAGG CGCTGCTGAA CGTGATCGCC GATGCCAAGA CCAAGGTCTA TGGCGATGCC GATCCGGCGC TGACCTACCA AGTGTCTGGG CTGAAGAACG GCGACACCGC CGGCGCCGTG CTCAACGGCG GTAGCCTGAG TCGAGTTGCC GGTGAAAATG TCGGCACCTA CGGCATAAAC CAGGGCGACC TGGCACTGAA CAGCGGCAAC TACGACCTGA GCTATCAGGG CAACAACCTG ACCATCACCA AGGCGCTGCT GAACGTGATC GCCGACGCCA AGACCAAGGT CTACGGCGAC GCCGATCCGA GCCTGACCTA CCGGGTCAGC GGGCTGAAGA ATGGCGACAG CGCCGGTTCG ATCCTGACCG GTGGCCTGAA CCGCGCCGCG GGCGAGAACG TGGGCGTGTA CGGCATCAAC CAGGGCGACC TGGCATTGAA CAGCGGCAAC TACGACCTGG CCTACCAGGG CAATGACCTG ACCATCACCA AGGCGCTGCT GAACGTGATC GCCGACGCCA AGACCAAGGT CTACGGCGAC GCCGACCCGA GCCTGACCTA CCAGGTCAGC GGTCTGAAGA ACGGCGACAG CGCAGGCGCG ATCCTCACCG GCGGGCTGAA CCGTGCCGCG GGCGAGAACG TGGGCGTGTA CGGCATCAAC CAGGGCGACC TGGCATTGAA CAGCGGCAAC TACGACCTGG CCTACCAGGG CAACAACCTG ACCATCACCA AGGCGCTGCT GAACGTGATC GCCGACGCCA AGACCAAGGT CTACGGCGAC GCCGACCCGA GCCTGACCTA CCAGGTCAGC GGTCTGAAGA ACGGCGACAG CGCAGGCGCG ATCCTCACCG GCGGGCTGAA CCGTGCCGCG GGCGAGAACG TGGGCGTGTA CGGCATCAAC CAGGGCGACC TGGCATTGAA CAGCGGCAAC TACGACCTGG CCTACCAGGG CAACAACCTG ACCATCACCA AGGCGCTGCT GAACGTGATC GCCGACGCCA AGACCAAGGT CTACGGCGAT GCCGACCCGA GCCTGACCTA CCAGGTCAGC GGGCTGAAGA ACGGCGACAG CGCCGGTTCG ATCCTGACCG GCGGGCTGAA CCGTGCCGCG GGCGAGAACG TGGGTGTGTA CGGCATCAAC CAGGGCGACC TGGCACTGAA CAGCGGCAAC TACGACCTGA GCTATCAGGG CAATAACCTG ACCATCACCA AGGCGCTGCT GAACGTGATC GCCGACGCCA AGACCAAGGT CTACGGCGAT GCCGACCCGA GCCTGACCTA CCAGGTCAGC GGGCTGAAGA ACGGCGACAG CGCAGGCGCG ATCCTCACCG GCGGGCTGAA CCGTGCCGCG GGCGAGAACG TGGGTGTGTA CGGCATCAAC CAGGGCGACC TGGCACTGAA CAGCGGCAAC TACGACCTGG CCTACCAGGG CAATGACCTG ACCATCACCA AGGCGCTGCT GAACGTGATC GCCGACGCCA AGACCAAGGT CTACGGCGAT GCCGACCCGA GCCTGACCTA CCAGGTCAGC GGTCTGAAGA ACGGCGACAG TGCAGGCGCG ATCCTCACCG GCGGGCTGAA CCGTGCCGCG GGCGAGAACG TGGGCGTGTA TGGCATCAAC CAGGGCGGCC TGGTGCTGAC CAGCGGCAAC TATGACCTGG CCTACCAGGG CAATGACCTG ACCATCACCA AGGCGCTGCT CAACGTATTC GCCGACGCCA AGAGCAAGCA GGTCGGCAGC GTCGACCCGG CGCTGACCTA CCAGGTGAGC GGCCTGAAGA ATGGCGACAG TGCCGGCCAG GTGCTCGCCG GTGGACTCGG TCGGATGGGC GGCGAGGCGG TCGGCCAGTA CGACATCCTC CAGGGCGGGC TCGCGCTTAC CAGCGGCAAC TATCAGCTCA ACTACCAGGG CAACCTGCTG AGCATCCTGC CGCTGCCGGT CAATCCGGGC GACCTGGGCC AACTGGCGGC GTTCTCCGAT CTGCGCGAAC TGCAGAAAGG GCGCGATCCG GATACCCCCG GGGACGCGGT CTACCGCACC ACCACGCTGG AAAACCCGTT CCTCGAAAAT CCCTTCCTGC GTGCCTACGC TCTGGGGATG GACGTCAGCG ACCCGAACCT GCTGCCGGCG ACCGCCGCGG GTCCGGCCGA GGACGCCAGC GCCAAGCGGG TGGGCCAGTT CACCGATCGT CCGCTGCGGG CAGAGGCGGA GAGTGGGGCG GGCTGCTCGA ACCAGAGCTA CCTGGCCGAC TACTGGAGCT GCTTCAACAA GCCTCTGAAC TTCTAA
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Protein sequence | MIWKAFFWHI GRHVNYFSDF RHLTDEMKCW KTDVRHVDRE IFMVRPDNQR DKRTTSKAGR EGRFVLAASS TLMFAIASIN AAMAAPTGAQ FNPNEIKISQ QGKTTLIDQS TQRAIINWKG FDVSADEAVR FNQPGVTSST LNRVTAGQES VIAGRISAPG QVIIYNSNGV VFSGTAKVDV GSLITTTANI SDEHFRQGKL IFDQPGNPNA RIVNDGSISV AEKGLAAFVA PSVANNGVIN ARLGTVAMAA GNAATIDLYG DGLVSIAVTD PVTRKPQDAQ ALVSNGGAIQ ADGGSVLITA EQASRVVDNA VNLSGVILAR GTEVREGSVA LVSKSGDIQV AGKIDVSGPK NGGDVLVSGQ QVVLASSASV DARGAAQGGS VRIGGDFQGR GELPRAKNTT LDKGSSIDVS ATGKGNGGLA VVWSDGNTRM DGRILARGGA QGGNGGLVET SGKVNLSIAD SAYVSVAAPY GNGGTWLLDP TTLRIVASGG TSGSVGGANG ASGNATVNAS VVTGALAGGR VTLSASDRLS VEAPLITNNL GGASRGLELI ATGPAGAVDI SAPILFRNGS LAIRAGGNIN FLSGGTPQTS GIVDLGSGTL WMQTSTTGKI SQQAGTALIA ANLAGRAGSI DLGSWDNYAG NLALQTFNGA LKYRQSNSTG VTTSGTVFDP FIASQSMTGT AQNIVSSVGT RVLEANSRGT TGNYTLTADG NSEFDRLVFT ALPYRRVSGS ASFPTNDSSD YLVTNLRYRV NGSDVTATPT GGTPSGFTVA AGNGSVTTWA GNWGTSWGVK GFGGVIGVTD ELQYDVGTGL TEELIFGLGG KTSRVDTRLD LFMREGPFGS FAERAQVEMF KTTTTAGDIL SRQQTATLTA GDASRVYGDA NPALTATMSG INAIDAYVNS QFNDLYQVTA STTATQASNV GQYAITGNAN GSEYFSQRYQ LVRQDGKLTV TPAQLIVSAD ARSKVYGDAD PSLTYQVSGL KNGDTAGSVL TGNLGRVAGE NVGNYGILQG GLGLNTANYT LSYVGNDLRI TPAQLNVIAD AKTKVYGDLD PTLTYQVSGL KRGDTAGAVL NGGSLSRVAG ENVGVYGINQ GGLGLVSSNY TLNYQGNDLT ITKALLNVIA DAKTKVYGDA DPSLTYQVSG LKNGDSAGAI LTGGLNRAAG ENVGVYGINQ GDLALNSGNY DLAYQGNNLT ITKALLNVIA DAKTKVYGDA DPSLTYQVSG LKNGDSAGAI LTGGLNRAAG ENVGVYGINQ GDLALNSGNY DLAYQGNNLT ITKALLNVIA DAKTKVYGDA DPSLTYQVSG LKNGDSAGSI LTGGLNRAAG ENVGVYGINQ GDLALNSGNY DLSYQGNNLT ITKALLNVIA DAKTKVYGDA DPSLTYQVSG LKNGDSAGAI LTGGLNRAAG ENVGVYGINQ GDLALNSGNY DLSYQGNNLT ITKALLNVIA DAKTKVYGDA DPSLTYQVSG LKNGDSAGAI LTGGLNRAAG ENVGVYGINQ GDLALNSGNY DLAYQGNNLT ITKALLNVIA DAKTKVYGDA DPALTYQVSG LKNGDTAGAV LNGGSLSRVA GENVGTYGIN QGDLALNSGN YDLSYQGNNL TITKALLNVI ADAKTKVYGD ADPSLTYRVS GLKNGDSAGS ILTGGLNRAA GENVGVYGIN QGDLALNSGN YDLAYQGNDL TITKALLNVI ADAKTKVYGD ADPSLTYQVS GLKNGDSAGA ILTGGLNRAA GENVGVYGIN QGDLALNSGN YDLAYQGNNL TITKALLNVI ADAKTKVYGD ADPSLTYQVS GLKNGDSAGA ILTGGLNRAA GENVGVYGIN QGDLALNSGN YDLAYQGNNL TITKALLNVI ADAKTKVYGD ADPSLTYQVS GLKNGDSAGS ILTGGLNRAA GENVGVYGIN QGDLALNSGN YDLSYQGNNL TITKALLNVI ADAKTKVYGD ADPSLTYQVS GLKNGDSAGA ILTGGLNRAA GENVGVYGIN QGDLALNSGN YDLAYQGNDL TITKALLNVI ADAKTKVYGD ADPSLTYQVS GLKNGDSAGA ILTGGLNRAA GENVGVYGIN QGGLVLTSGN YDLAYQGNDL TITKALLNVF ADAKSKQVGS VDPALTYQVS GLKNGDSAGQ VLAGGLGRMG GEAVGQYDIL QGGLALTSGN YQLNYQGNLL SILPLPVNPG DLGQLAAFSD LRELQKGRDP DTPGDAVYRT TTLENPFLEN PFLRAYALGM DVSDPNLLPA TAAGPAEDAS AKRVGQFTDR PLRAEAESGA GCSNQSYLAD YWSCFNKPLN F
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