Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5181 |
Symbol | clpB |
ID | 5354327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 5326209 |
End bp | 5328773 |
Gene Length | 2565 bp |
Protein Length | 854 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640814227 |
Product | ATP-dependent chaperone ClpB |
Protein accession | YP_001350513 |
Protein GI | 152985423 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.399892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAATAG ACCGTTTGAC CAGCAAGCTG CAACTCGCGC TCTCCGACGC CCAGTCCTTG GCCGTCGGCC ACGACCACCC GGCCATCGAG CCGGTGCATC TGCTTTCCGC CCTGCTCGAA CAGCAAGGCG GCTCGATCAA GCCCCTGCTG ATGCAGGTCG GCTTCGATAT CGCCGCCCTG CGCAGCGGCC TCAACAAGGA ACTCGACGCG CTGCCGAAGA TCCAGAGCCC GACCGGCGAC GTGAACCTGT CCCAGGACCT CGCGCGCCTG CTCAATCAGG CTGACCGCCT GGCCCAGCAG AAGGGCGACC AGTTCATCTC CAGCGAGCTG GTATTGCTGG CCGCGATGGA CGAGAACACC AGGCTCGGCA AGCTGCTGCT CGGCCAGGGC GTGTCACGCA AGGCGCTGGA GAATGCCGTG GCCAACCTGC GCGGCGGCGA AGCGGTGAAC GACCCGAACG TCGAGGAGTC GCGCCAGGCG CTGGACAAGT ACACCGTCGA CATGACCAGG CGCGCCGAGG AAGGCAAGCT CGACCCGGTG ATCGGTCGCG ACGACGAGAT CCGCCGGACC ATCCAGGTCC TGCAGCGGCG GACGAAGAAC AACCCGGTGC TGATCGGCGA ACCCGGTGTC GGCAAGACCG CCATCGTCGA AGGCCTGGCC CAGCGCATCA TCAATGGCGA AGTGCCGGAT GGCCTCAAGG ACAAGCGCCT GCTGGCCCTG GACATGGGCG CGCTGATCGC CGGCGCAAAA TTCCGCGGCG AATTCGAGGA ACGACTGAAG GCGGTCCTCA ACGAACTGGG CAAGCAGGAA GGGCGGGTCA TCCTGTTCAT CGACGAACTG CACACCATGG TCGGCGCCGG CAAGGCGGAA GGCGCCATGG ATGCCGGCAA CATGCTCAAG CCGGCTCTGG CGCGAGGCGA ACTGCACTGC GTCGGCGCCA CCACCCTCGA CGAGTATCGC CAGTACATCG AGAAGGACGC CGCCCTGGAA CGCCGCTTCC AGAAGGTGCT GGTGGACGAG CCGAGCGAGG AAGACACCAT CGCCATCCTC CGTGGCCTCA AGGAGCGCTA CGAGGTGCAC CACGGGGTGA GCATCACCGA CGGCGCGATC ATCGCCGCCG CCAAGCTGTC GCACCGCTAC ATCACCGACC GGCAGTTGCC GGACAAGGCC ATCGACCTGA TCGACGAGGC CGCCAGCCGC ATCCGCATGG AGATCGACTC CAAGCCGGAG GAACTGGATC GTCTCGACCG TCGCCTGATC CAGCTGAAGA TCGAGCGCGA GGCGCTGAAG AAGGAAGACG ACGAAGCCAC CAGGAAGCGC CTGGCCAAGC TGGAAGAGGA CATCGTCAAG CTGGAACGCG AGTACGCCGA CCTGGAAGAG ATCTGGAAGT CGGAGAAGGC CGAGGTACAG GGTTCGGCGC AGATCCAGCA GAAGATCGAG CAGGCCAAGC AGGAAATGGA GGCGGCGCGG CGCAAGGGCG ACCTGGAAAG CATGGCGCGC ATCCAGTACC AGACCATCCC GGACCTGGAA CGCAGCCTGC AGATGGTCGA CCAGCACGGC AAGACCGAGA ACCAGTTGCT GCGCAACAAG GTGACCGACG AGGAAATCGC CGAGGTGGTC TCCAAGTGGA CCGGTATCCC GGTGTCGAAG ATGCTCGAGG GCGAGCGCGA GAAGCTGCTG CGCATGGAGC AGGAACTGCA TCGCCGGGTC ATCGGCCAGG ACGAGGCGGT GGTCGCCGTG TCCAATGCGG TGCGCCGTTC GCGCGCCGGC CTGGCCGATC CGAACCGGCC CAGCGGCTCG TTCCTCTTCC TCGGCCCGAC CGGGGTGGGC AAGACCGAGC TGTGCAAGGC GCTGGCCGAG TTCCTCTTCG ATACCGAGGA GGCGCTGGTG CGGATCGACA TGTCCGAGTT CATGGAGAAA CACTCCGTGG CTCGCCTGAT CGGCGCGCCT CCGGGCTACG TCGGTTTCGA GGAGGGCGGC TACCTGACCG AGGCGATCCG CCGCAAGCCG TATTCGGTGG TGCTGCTGGA CGAAGTGGAG AAGGCCCACC CGGACGTCTT CAACATTCTC CTGCAGGTAC TCGAGGATGG CCGCCTGACC GACAGCCACG GGCGCACCGT GGATTTCCGC AACACCGTGG TGGTGATGAC CTCCAACCTC GGCTCGGCGC AGATCCAGGA ACTCGCCGGT GACCGCGAGG CGCAGCGTGC CGCGGTGATG GATGCGGTCA ACGCGCATTT CCGTCCGGAA TTCATCAACC GGATCGATGA AGTGGTGGTG TTCGAACCGC TGGCACGTGA GCAGATCGCC GGCATCGCCG AGATCCAGCT TGGCCGCCTG CGCAAGCGGC TGGCCGAGCG CGAGCTGAGC CTGGACTTGA GTCAGGAGGC ACTGGACAAG CTGATCGCCG TCGGCTTCGA CCCGGTCTAC GGTGCGCGTC CGCTGAAGCG GGCAATCCAG CGCTGGATCG AGAACCCGCT GGCGCAACTG ATCTTGGCCG GCAAGTTCGC GCCGGGGACG AAGGTCTCGG CGAAGGTGGA CGGCGACGAG ATCGTGTTCG CCTGA
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Protein sequence | MRIDRLTSKL QLALSDAQSL AVGHDHPAIE PVHLLSALLE QQGGSIKPLL MQVGFDIAAL RSGLNKELDA LPKIQSPTGD VNLSQDLARL LNQADRLAQQ KGDQFISSEL VLLAAMDENT RLGKLLLGQG VSRKALENAV ANLRGGEAVN DPNVEESRQA LDKYTVDMTR RAEEGKLDPV IGRDDEIRRT IQVLQRRTKN NPVLIGEPGV GKTAIVEGLA QRIINGEVPD GLKDKRLLAL DMGALIAGAK FRGEFEERLK AVLNELGKQE GRVILFIDEL HTMVGAGKAE GAMDAGNMLK PALARGELHC VGATTLDEYR QYIEKDAALE RRFQKVLVDE PSEEDTIAIL RGLKERYEVH HGVSITDGAI IAAAKLSHRY ITDRQLPDKA IDLIDEAASR IRMEIDSKPE ELDRLDRRLI QLKIEREALK KEDDEATRKR LAKLEEDIVK LEREYADLEE IWKSEKAEVQ GSAQIQQKIE QAKQEMEAAR RKGDLESMAR IQYQTIPDLE RSLQMVDQHG KTENQLLRNK VTDEEIAEVV SKWTGIPVSK MLEGEREKLL RMEQELHRRV IGQDEAVVAV SNAVRRSRAG LADPNRPSGS FLFLGPTGVG KTELCKALAE FLFDTEEALV RIDMSEFMEK HSVARLIGAP PGYVGFEEGG YLTEAIRRKP YSVVLLDEVE KAHPDVFNIL LQVLEDGRLT DSHGRTVDFR NTVVVMTSNL GSAQIQELAG DREAQRAAVM DAVNAHFRPE FINRIDEVVV FEPLAREQIA GIAEIQLGRL RKRLAERELS LDLSQEALDK LIAVGFDPVY GARPLKRAIQ RWIENPLAQL ILAGKFAPGT KVSAKVDGDE IVFA
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