Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5115 |
Symbol | |
ID | 5354792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 5263597 |
End bp | 5265033 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640814161 |
Product | putative porin |
Protein accession | YP_001350451 |
Protein GI | 152988329 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.470464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACCAGCG CTACGCTGGG GCTGGCCTTG CTGGCTGCGA GCGCGCCGGG CTGGGCGGCC GACGAGCAGG AAAACCCGCC GGCCCCGGAC AACCCGAGCT ACGCCGCCGA AGTGCAGAGC ATTCCCAGCG TGGCGAAGCC GATCAAGGGC CAGGCCGGCG CCACCGGGCT GGTCGAAGGC CAGAGCCTGA CCCTGACCAC CCGCAACTTC TACTCGCGGG AAAACATGAA GGACAGCTTC ACCTTCCGCA TTCCCAAGGC CGGCGGCGGC TCCCAGCGCA TCCACCAGCG CAACGCCTGG GTCCAGGGCA CCGTTCTCAA GTACAGCTCG GGCTACACCC AGGGCACCGT CGGTTTCGGT TTCGACGTCG CGGCATTCAA CGAGATCGCC CTGGAGCGCG GCAAGGGCCG CATCGGCGGC GGCGGCAACC GGACCCTGGC GAACAGCGAC GGCGAGGCGC TCGGCGAGTG GTCCAAGCTG GGCGTCGCCA ACATCCGCCT GCGCGCCTCC AACACCGAAT TCAAGGCCGG TCGCTTCCTG GTCAACACTC CGGTGTTCAG CTACATCGAC AACCGCGCCC TGCCCTCCAG CTTCACCGGC TTCGCCGTGA CCAGCGAGGA GCTGGACAAC CTCAGCCTGC AGGCCGGCAG CTTCCGCAAG GTCAGCCCGC GGACCGGCTC CGGCGACGAG GACATGACCA CCGAGTACGG CACCCGCCAG GTCAAGGGCG ACCGCCTGAA CTACCTCGGC GGCAACTACA AGCCGCTCGA CGGACTGGAG ATATCGCTCT ACGGCTCGCA CTTCCAGGAC GTCTGGAACC AGTACTACCT CGGGGTCACC CACGACATCG GCGACCTGGA GAACGGCATC GCCCTGCGCA CCGCCTTCAA CGGCTACCAC ACCGGCGACA CCGGCGCGCG CGAAGCCGGC TACATCGACA ACGACACCTG GAGCCTGGCC TTCACCCTCG GCCATCGCGC CCACGCCCTG ACCCTGGCCT ACCAGCAGGT CGATGGCAAC GAATACTTCG ACTACGTGCA CGAGACCTCG GCGATCTTCC TCGCCAACTC GATACTCGCC GACTACAACA GCCCCAACGA GAAATCCGCG CAGATCCGCT ACGAGACCGA CTGGAGCTAC TACGGCGTAC CCGGCCTGAG CACCGGGGTG TGGTACGTGA AGGGCTGGGA CATCGACGGC ACCCACTACG ACGGCGACCG CAACGGCGCC TACGGCAACT ATGCCGAGGT GCGCGCCCAG GACGGCGAGA AACACCACGA ACTGGGCCTG ATGGCGGCCT ACAAGGTGCA GAACGGCCCG ATCAAGGACA GCACCTTCAA GCTCACCTAC ATGATGCACA AGGCCAGCCA GAACCAGATC GACGGCAGCG TCAACGAACT GCGCCTGGTC AGCACCTTCC CCTTCAACCT GCTGTAA
|
Protein sequence | MTSATLGLAL LAASAPGWAA DEQENPPAPD NPSYAAEVQS IPSVAKPIKG QAGATGLVEG QSLTLTTRNF YSRENMKDSF TFRIPKAGGG SQRIHQRNAW VQGTVLKYSS GYTQGTVGFG FDVAAFNEIA LERGKGRIGG GGNRTLANSD GEALGEWSKL GVANIRLRAS NTEFKAGRFL VNTPVFSYID NRALPSSFTG FAVTSEELDN LSLQAGSFRK VSPRTGSGDE DMTTEYGTRQ VKGDRLNYLG GNYKPLDGLE ISLYGSHFQD VWNQYYLGVT HDIGDLENGI ALRTAFNGYH TGDTGAREAG YIDNDTWSLA FTLGHRAHAL TLAYQQVDGN EYFDYVHETS AIFLANSILA DYNSPNEKSA QIRYETDWSY YGVPGLSTGV WYVKGWDIDG THYDGDRNGA YGNYAEVRAQ DGEKHHELGL MAAYKVQNGP IKDSTFKLTY MMHKASQNQI DGSVNELRLV STFPFNLL
|
| |