| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4978 |
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| Symbol | lpxC |
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| ID | 5358546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 5133250 |
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| End bp | 5134161 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640814024 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_001350314 |
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| Protein GI | 152987304 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.158914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAAC AACGCACCTT GAAGAACATC ATCCGGGCTA CTGGCGTCGG TCTGCATTCG
GGGGAGAAGG TTTACCTGAC CCTGAAACCG GCGCCGGTGG ACACCGGCAT CGTGTTCTGC
CGCACCGACC TGGATCCGGT AGTGGAAATC CCGGCCCGGG CCGAGAACGT CGGCGAAACC
ACCATGTCGA CCACCCTGGT CAAGGGTGAC GTCAAAGTGG ATACGGTGGA GCACCTGCTC
TCGGCCATGG CCGGCCTGGG TATCGACAAC GCCTACGTCG AGCTGTCCGC TTCGGAAGTG
CCGATCATGG ATGGCAGCGC TGGTCCGTTC GTATTCCTGA TCCAGTCCGC CGGATTGCAA
GAGCAGGAAG CGGCCAAGAA GTTCATCCGC ATCAAGCGCG AGGTCAGCGT CGAGGAAGGC
GACAAGCGCG CCGTCTTCGT TCCGTTCGAC GGCTTCAAGG TCAGCTTCGA GATCGATTTC
GATCACCCGG TCTTCCGTGG CCGCACCCAG CAGGCTTCGG TCGACTTCTC CAGCACTTCC
TTCGTCAAGG AAGTCAGCCG CGCCCGGACC TTCGGCTTCA TGCGCGACAT CGAGTACCTG
CGTTCGCAGA ACCTGGCGCT CGGCGGTAGC GTGGAGAACG CGATCGTGGT CGACGAGAAC
CGCGTGCTCA ACGAAGACGG CCTGCGTTAC GAGGACGAGT TCGTCAAGCA CAAGATCCTG
GATGCCATCG GCGACCTGTA CCTGCTCGGC AACAGCCTTA TCGGCGAGTT CCGCGGCTTC
AAGTCCGGCC ATGCCCTGAA CAACCAACTG CTGCGTTCGC TGATCGCAGA CAGGGACGCT
TGGGAAGTGG TGACCTTCGA AGACGCGCGT ACCGCGCCTA TTTCCTATAT GCGCCCGGCG
GCAGCAGTGT AG
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| Protein sequence | MIKQRTLKNI IRATGVGLHS GEKVYLTLKP APVDTGIVFC RTDLDPVVEI PARAENVGET
TMSTTLVKGD VKVDTVEHLL SAMAGLGIDN AYVELSASEV PIMDGSAGPF VFLIQSAGLQ
EQEAAKKFIR IKREVSVEEG DKRAVFVPFD GFKVSFEIDF DHPVFRGRTQ QASVDFSSTS
FVKEVSRART FGFMRDIEYL RSQNLALGGS VENAIVVDEN RVLNEDGLRY EDEFVKHKIL
DAIGDLYLLG NSLIGEFRGF KSGHALNNQL LRSLIADRDA WEVVTFEDAR TAPISYMRPA
AAV
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