| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4879 |
|---|
| Symbol | |
|---|
| ID | 5356562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 5034997 |
|---|
| End bp | 5035758 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640813925 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001350215 |
|---|
| Protein GI | 152988393 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3233] Predicted deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.222084 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAC GCAGCCTGCT GCTGGTGCTG CATGACGTGG CTCCGGAGAC CTGGCCGGAC
TACCGGCCCT TCGTCGAGGC GGTGGATGCT CTCGGCCAGG TGCCGATGAC CTGGCTGGTG
GTCCCCGATT TCCACCATCG CAACCCGCTG GAAAACGACG AGGCGTTCTG CGAACTGCTC
TCGCGACGGG TGGCGCATGG CGACGAACTG GCTCTCCACG GCTTCTATCA CTACGATGAC
GCCCCACCAC CGCGCACTCC GGGGCAATAC TTCATGCGTC GCATCTATAC CTGGGAGGGA
GAGTTCTACG CCCTCGACCA CACCGAGGCC AAGGCCCGCC TGGCCGCCGG CATCCAGCTG
TTCCGCCGGC GCGGCTGGCC GCTGCACGGT TTCGTCGCGC CGGCCTGGCT GATGAGCGCC
GGCACCCGCC AGGCGCTCGG CGAGAGCGGA CTGCGCTACA CCAGCGACCC GTCCAACCTG
TACCTGCTTC CCCGACTGCA ACCGATCGAG GCTCCCGGCC TGGTCTGGAG CGCACGCAGT
GCCTGGCGTC GCGGCCTCTC CTGGGCGCTC AGCGAGCAGC GCCGGCGGGC CTGGCGCGAA
GCGCCGGTGA TCCGTCTCGG ACTCCATCCC GTCGACATGC GTCATCGCTT CTCCCGCGAA
TACTGGCTGC GCACCCTCGA GACCCTGCTG GCCGAGGGGC GCCGTCCGCT GACCAAGATC
GACTGGCTGG ACCGCCAGCA GGCTTCGGAC CGCGCGGCAT GA
|
|---|
| Protein sequence | MAERSLLLVL HDVAPETWPD YRPFVEAVDA LGQVPMTWLV VPDFHHRNPL ENDEAFCELL
SRRVAHGDEL ALHGFYHYDD APPPRTPGQY FMRRIYTWEG EFYALDHTEA KARLAAGIQL
FRRRGWPLHG FVAPAWLMSA GTRQALGESG LRYTSDPSNL YLLPRLQPIE APGLVWSARS
AWRRGLSWAL SEQRRRAWRE APVIRLGLHP VDMRHRFSRE YWLRTLETLL AEGRRPLTKI
DWLDRQQASD RAA
|
|---|
| |