| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4032 |
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| Symbol | |
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| ID | 5357936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 4170861 |
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| End bp | 4172105 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640813082 |
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| Product | ECF subfamily RNA polymerase sigma factor |
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| Protein accession | YP_001349386 |
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| Protein GI | 152989089 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.268064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGGGCGC ACGGCGAGCC GTTGCGCAGC CGCATCGATG CGCTCTACCG CGAGGAGTCG
CGGCGCGTGC TGGCGACCCT GATCCGCCTG CTCGGCGATT TCGAACTGGC CGAGGAGGCA
TTGCACGACG CCTTCATCGC GGCCGTCGAA CAGTGGCCGC GCGACGGTAT CCCACGCAAC
CCGCGCGCCT GGCTGGTTTC CGCCGGGCGC TTCAAGGCCA TCGACAACCT GCGCCGGCGC
TCGCGCTTCG ACGCCTCGCA GCGGCTGCTC GCCGAGCAGC TGGAAGACCA GGGCGAAGCG
CCGCCGGAGG AGGGCGAGGC GGTGGAAGAC GACCGGTTGC GCCTGATCTT CACCTGCTGC
CACCCGGCGC TGACCGCCGA GGCCCAGGTG GCGCTGACCC TGCGCGAGGT CTGCGACCTG
CGCACCGAGG AGATCGCCCG CGCGTTCCTC GCCGCGCCGA GCGCCATCGC CCAGCGCATC
GTGCGGGCGA AGAACAAGAT TCGCGACGCC CGGATTCCCT ACCAGGTACC GGCCCTGGAC
GAGTTGCCCG GGCGCCTGGA CAACGTCCTG CAGGTCATCT ACCTGGTGTT CAACGAAGGC
TACTCGGCGT CTGCCGGCGA GCGCCTGACC CGCGCCGATC TCAGCGGCGA GGCGATCCGC
GTCGGTCGCC TGCTGGTCGA GCTGCTGCCG GACCCGGAGG CCCTCGGCCT GCTCGCCCTG
ATGCTGCTGC ACGATTCGCG GCGCCAGGCG CGTACCTCGG CCAGCGGCGA ACTGGTGCGG
CTCGACGAGC AGGACCGCGC GCTGTGGAAC CGCGAACTGA TCGGCGAAGG CCTCGACCTG
GTCGAGCGGG CCCTGGCCAG CCGCCGCTTC GGTCCCTATA CCCTGCAGGC AGCGATCGTC
GCGGTGCACG CTCGCGCGCC GCGCGCCGAG GATACCGACT GGGTGCGGAT CGTCGCTCTC
TACGACATGC TGCTGCGCCT GGCGCCATCG CCGGTGATCG AGCTCAACCG CGCCGTGGCC
CTGGCCATGC GCGACGGCAT CGAGGCCGGG CTGGCGGTGG TCGACGCGCT GCTGGCGCGC
GGCGAGCTGA ATGGCTACCA CCTGGCGCAT TCGGCGCGCG CCGACTTCTG CCGCCGGCTC
GGCCGCCGCC AGGAGGCACG CGAGGCCTAC CGCGCGGCGC TGGCCCTGGC GCGCCAGGAG
CCGGAGCGAC GCTTCATCGA GCGACGCCTG CGCGAGCTCG ACTGA
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| Protein sequence | MRAHGEPLRS RIDALYREES RRVLATLIRL LGDFELAEEA LHDAFIAAVE QWPRDGIPRN
PRAWLVSAGR FKAIDNLRRR SRFDASQRLL AEQLEDQGEA PPEEGEAVED DRLRLIFTCC
HPALTAEAQV ALTLREVCDL RTEEIARAFL AAPSAIAQRI VRAKNKIRDA RIPYQVPALD
ELPGRLDNVL QVIYLVFNEG YSASAGERLT RADLSGEAIR VGRLLVELLP DPEALGLLAL
MLLHDSRRQA RTSASGELVR LDEQDRALWN RELIGEGLDL VERALASRRF GPYTLQAAIV
AVHARAPRAE DTDWVRIVAL YDMLLRLAPS PVIELNRAVA LAMRDGIEAG LAVVDALLAR
GELNGYHLAH SARADFCRRL GRRQEAREAY RAALALARQE PERRFIERRL RELD
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