| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3928 |
|---|
| Symbol | |
|---|
| ID | 5355361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 4064916 |
|---|
| End bp | 4066109 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640812977 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001349281 |
|---|
| Protein GI | 152986524 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGTC ATTTTCTTCG TTCGCCGCTG GTCGGCCTGC TCGCCTGCCT GCTGGCGCTG
GTGGTCGCCA TGGGGGTCGG GCGCTTCTCC CTGACCCCGC AACTGCCGCA CCTGATCCGC
GAAGGCCAGC TCGACCTGAC CGGCGCCGGC CTGCTGGCCG CCGCCAATTA CCTCGGCTAC
CTGGTCGGCG CGCTGGACGC GCTGTTCGCC CGCGAAGCGC GGCAGGCGCG CCTGCGCCTG
CTGGTCGGGC TCTGGGCCTG CTTCGGCCTG ACCCTGGCCT CGGTCTGGGC CGAGGGCTTC
TGGCCGCACG CGCTGCTGCG CTTCGGCCTC GGCGTGGCCA GCGCCTGGGT GCTGGTCATG
GTCACCGCCC TCAGCCAGCG CCTCGCCGCG GAAAGCGGCC GGGCCCGGCT GGGCGCACTG
GTGTTCGCCG GCCCCGGCAT CGGAGTGATG GTCACCGGCC TGCTGGCGGC ATTGGGCAAC
GCCCTGGGGC AGGACTCGGT ATTCATCTGG AAGCTCTTCG CCGACCTCGC GTTGGTCCTG
GTCCTCATGC TCCTGCCGCT GCTGCCGCGC CCGGCCGCAC GCAACGCCGG CCACGACGCG
CCCGCCACGG CAAGCGAGAA CGCCGGCCTC GGCCGCCTGA CCTGGGCCTA CGGGCTGGTC
GGCCTCGGCT ACATCATTCC CGCCACCTTT CTCTCGCAGA TGGCCGCCAC GCGCTTCCAT
GGGCAATGGC AGGCCGACCT GTTCTGGCCC TGCTTCGGCC TGGCCTCGGC CACCGGGGTA
GTGCTGATCA GCCTGCGCCG GCAGCGCCCG GACGGGACCC GCCGCTGGCT GGTCGGCGCG
CTCTGGCTAC AGGCCGTCGG CGTGCTCGCC TGCCTGCTGC CGGGGATCGG CGGACTGGCC
CTCGGGGTAG TGCTGACCGG CCTGCCGTTC CTCGCCGGCA TGCAGTTGGT GATGCAATAC
GCTCGCGAAC TGGCGCCGCA TACGCCGCAG CGCAACGCTG GCCAACTGAC CACCGGTTTC
GCCCTCGGCC AGTTGCTCGG CCCGCTGCTG GCGGCGCTCA GCACGCATTT CGCCGGCGGC
CTGCAACCGG CGCTGGCGCT CGCCGGGCTC GGCCTGGTCC TGGCCGGCCT GCTGTTGCGC
CGGCCGCACT CGCTCAGCGT CGCAGCAGGC GTCGCAGCCA CTGCTCGCCG CTGA
|
|---|
| Protein sequence | MSRHFLRSPL VGLLACLLAL VVAMGVGRFS LTPQLPHLIR EGQLDLTGAG LLAAANYLGY
LVGALDALFA REARQARLRL LVGLWACFGL TLASVWAEGF WPHALLRFGL GVASAWVLVM
VTALSQRLAA ESGRARLGAL VFAGPGIGVM VTGLLAALGN ALGQDSVFIW KLFADLALVL
VLMLLPLLPR PAARNAGHDA PATASENAGL GRLTWAYGLV GLGYIIPATF LSQMAATRFH
GQWQADLFWP CFGLASATGV VLISLRRQRP DGTRRWLVGA LWLQAVGVLA CLLPGIGGLA
LGVVLTGLPF LAGMQLVMQY ARELAPHTPQ RNAGQLTTGF ALGQLLGPLL AALSTHFAGG
LQPALALAGL GLVLAGLLLR RPHSLSVAAG VAATARR
|
|---|
| |