| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3893 |
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| Symbol | |
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| ID | 5359279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 4024516 |
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| End bp | 4027623 |
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| Gene Length | 3108 bp |
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| Protein Length | 1035 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640812943 |
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| Product | multidrug ABC transporter |
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| Protein accession | YP_001349247 |
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| Protein GI | 152988148 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGCCGC GCGCCGGGAT TTCCGGCTGG TGCGTCCGTC ATCCGATCGC CACCGTGTTG
CTGACCCTGG CATCGTTGCT GCTGGGCCTG CTGGCGTTCC TCCGGCTGGG AGTGGCGCCG
TTGCCGGAGG CCGACTTCCC GACCATCCAG ATCAATGCCC TGCTGCCCGG CGGCAGCCCG
GAAACCATGG CTTCGTCGGT GGCCACCCCG CTGGAGGTGC AGTTCAGCGC GATCCCGGGA
ATCACCGAGA TGACGTCCAG CAGCGCCCTG GGCACGACCA CCCTGACCCT GCAGTTCAAC
CTCGACAAGA GCATCGACGT TGCCGCCCAG GAGGTCCAGG CGGCGATCAA CGCCGCAGCC
GGGCGGCTGC CGGTGGACAT GCCGAACCTG CCGACCTGGC GCAAGGTCAA CCCGGCCGAC
AGCCCGATCA TGATCCTGCG GGTCAATTCG AACATGATGC CGCTGATCGA GCTCAGCGAT
TACGCCGAGA CCATCCTCGC CCGCCAGCTC AGCCAGGTGA ACGGGGTGGG GCAGATCTTC
GTGGTCGGCC AGCAGCGCCC GGCGATCCGC ATCCAGGCCC AGCCGGAAAA GCTCGCCGCC
TACCAGCTGA CCCTGGCCGA CCTGCGCCAG TCGCTGCAGT CGGCCAGCGT CAACCTGGCC
AAGGGCGCGC TCTACGGCGA GGGCCGGGTA TCGACCTTGG CGGCCAACGA CCAGTTGTTC
AACGCCAGCG ACTACGACGA CCTGGTGGTC GCCTACCGCC AGGGCGCGCC GGTGTTCCTC
AAGGACGTGG CGCGCATCGT CTCCGCCCCC GAGGACGACT ACGTGCAGGC CTGGCCGAAT
GGCGAGCCGG GGGTGGCACT GGTGATCCTG CGCCAGCCGG GGGCGAACAT CGTCGACACC
GCCGATGCGA TCCAGGCCGC GCTGCCGCGC CTGCGCGAGA TGTTGCCGGC GACCATCGAG
GTCGACGTGC TCAACGACCG TACCCGGACC ATCCGTTCGT CGCTGCACGA GGTCGAGCTG
ACCCTGCTGC TGACCATCGG CCTGGTGGTG CTGGTGATGG GCCTGTTCCT CCGCCAGCTG
TCGGCCACCC TGATCGTCGC CACGGTGCTG GCGGTCTCCC TGAGCGCCAG CTTCGCGGCG
ATGTACGTGC TCGGCTTCAC CCTCAACAAC CTGACCCTGG TGGCACTGAT CATCGCCGTC
GGCTTCATCG TCGACGACGC CATCGTGGTG GTGGAGAACA TCCACCGGCA CCTGGAGGCG
GGCGCCTCGA AGGTCGAGGC GGCGCTCAAG GGCGCGGCGG AGATCGGCTT TACCGTGATT
TCCATCAGCT TCTCGCTGAT CGCCGCGTTC ATCCCGTTGC TGTTCATGGG CGGGATCGTC
GGCCGGCTGT TCCGCGAATT CGCGGTCAGC GTCACGGTGG CGATCCTGAT CTCGGTGGTC
GCTTCGCTGA CCCTGGCGCC GATGCTGGCC TCGCGCTTCA TGCCGGCGCT GCGGCATGCC
GAGGCGCCGA GAAAGGGCTT CGCCGAATGG CTGACCGCTG GCTATGACCG TGGCCTGCGC
TGGGCGCTCG GGCACCAGCG GCTGATGCTG GTCGGCTTCG CCTTCACCGT CCTGGTGGCG
GTGGCCGGCT ATGTCGGGAT TCCCAAGGGC TTCTTCCCGT TGCAGGACAC CGCGTTCGTG
TTCGGCACCA CCCAGGCGGC CGAGGATATT TCCTACGACG ACATGATCGC CAAGCACAGG
CAACTGGCCG GGATCATCGC CCGCGACCCG GCGGTACAGA GCTACAACCA CGCGGTGGGC
GTCACCGGCG GCAGCCAGAG CCTGGCCAAC GGGCGCTTCT GGATCGTCCT CAAGGACCGC
GGCGAGCGCG ACGTCTCGGT CGGCGAGTTC ATCGACCGGT TGCGCCCACA GCTGGCCAAG
GTGCCGGGGA TCATGCTCTA CCTGCGCGCG GCGCAGGACA TCAACCTCAG TTCCGGCCCC
TCGCGGACCC AGTACCAGTA CGCCCTGCGC AGCAGCGACA GCACCCAGCT GGCGCTCTGG
GCGCAGCGCC TCACCGAGCG CCTGAAGCAG GTGCCGGGAC TGATGGATGT GTCCAACGAC
CTGCAGGTCG GCGCCAGCGT CACCGCGCTG GACATCGACC GGGTGGCGGC GGCGCGCTTC
GGCCTCAGCG CCGAGGACGT CAGCCAGACG CTCTACGACG CTTTCGGCCA GCGCCAGGTC
GGCGAGTACC AGACCGAGGT CAACCAGTAC AAGGTGGTCC TCGAGCTCGA TGCGCGCCAG
CGCGGCCGCG CGGAAAGCCT GGACTGGTTC TACCTGCGCT CGCCGCTGAG CGGAGAGATG
GTCCCGCTGT CGGCCATCGC CACGGTCGCG CCGCCGCGCT CCGGGCCGTT GCAGATCAAC
CACAACGGCA TGTTCCCGGC GGTCAACCTG TCGTTCAACC TGGCCGCCGG GGTCTCGCTC
GGCGAGGCGG TACAGGCGGT GCAGCGGGCG CAGGAGGAGA TCGGCATGCC CTCGACCATC
ATCGGTGTGT TCCAGGGCGC GGCGCAGGCC TTCCAGAGTT CGCTGGCCTC GCAACCGTTG
CTGATCCTCG CCGCGCTGAT CGCGGTGTAC ATCATCCTCG GCGTGCTCTA CGAGAGTTTC
GTGCATCCGC TGACGATCCT CTCGACCCTG CCCTCGGCGG GGATCGGCGC GGTGTTCCTG
CTCTGGGCCT GGGGCCAGGA CTTCTCGATC ATGGCGCTGA TCGGCATCGT GCTGCTGATC
GGCATCGTCA AGAAGAACGG CATCCTCATG GTCGATTTCG CCATCGCCGC CCAGCGCGAG
CAGGGCCTGA GCGCCGAGCG GGCGATCTAC CAGGCCTGCC TGACCCGTTT CCGGCCGATC
ATGATGACCA CCCTGGCCGC GCTGCTCGGC GCCGTCCCGC TGATGATCGG CTTCGGCACC
GGCTCCGAGT TGCGCCAGCC GCTGGGCATC GCGGTGGTTG GCGGGCTACT GGTGAGCCAG
GTGCTGACCC TGTTCAGCAC GCCGGTGGTC TACCTGGCCC TGGACCGGCT GTTCCACCGT
CGCGAGGCGG TGTCGGCGGG CGAGTCCGGC CAGACGGCGG CGACATGA
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| Protein sequence | MTPRAGISGW CVRHPIATVL LTLASLLLGL LAFLRLGVAP LPEADFPTIQ INALLPGGSP
ETMASSVATP LEVQFSAIPG ITEMTSSSAL GTTTLTLQFN LDKSIDVAAQ EVQAAINAAA
GRLPVDMPNL PTWRKVNPAD SPIMILRVNS NMMPLIELSD YAETILARQL SQVNGVGQIF
VVGQQRPAIR IQAQPEKLAA YQLTLADLRQ SLQSASVNLA KGALYGEGRV STLAANDQLF
NASDYDDLVV AYRQGAPVFL KDVARIVSAP EDDYVQAWPN GEPGVALVIL RQPGANIVDT
ADAIQAALPR LREMLPATIE VDVLNDRTRT IRSSLHEVEL TLLLTIGLVV LVMGLFLRQL
SATLIVATVL AVSLSASFAA MYVLGFTLNN LTLVALIIAV GFIVDDAIVV VENIHRHLEA
GASKVEAALK GAAEIGFTVI SISFSLIAAF IPLLFMGGIV GRLFREFAVS VTVAILISVV
ASLTLAPMLA SRFMPALRHA EAPRKGFAEW LTAGYDRGLR WALGHQRLML VGFAFTVLVA
VAGYVGIPKG FFPLQDTAFV FGTTQAAEDI SYDDMIAKHR QLAGIIARDP AVQSYNHAVG
VTGGSQSLAN GRFWIVLKDR GERDVSVGEF IDRLRPQLAK VPGIMLYLRA AQDINLSSGP
SRTQYQYALR SSDSTQLALW AQRLTERLKQ VPGLMDVSND LQVGASVTAL DIDRVAAARF
GLSAEDVSQT LYDAFGQRQV GEYQTEVNQY KVVLELDARQ RGRAESLDWF YLRSPLSGEM
VPLSAIATVA PPRSGPLQIN HNGMFPAVNL SFNLAAGVSL GEAVQAVQRA QEEIGMPSTI
IGVFQGAAQA FQSSLASQPL LILAALIAVY IILGVLYESF VHPLTILSTL PSAGIGAVFL
LWAWGQDFSI MALIGIVLLI GIVKKNGILM VDFAIAAQRE QGLSAERAIY QACLTRFRPI
MMTTLAALLG AVPLMIGFGT GSELRQPLGI AVVGGLLVSQ VLTLFSTPVV YLALDRLFHR
REAVSAGESG QTAAT
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