| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3776 |
|---|
| Symbol | ccoP2 |
|---|
| ID | 5356964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 3909821 |
|---|
| End bp | 3910747 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640812826 |
|---|
| Product | cbb3-type cytochrome c oxidase subunit III |
|---|
| Protein accession | YP_001349130 |
|---|
| Protein GI | 152989211 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCT TCTGGAGTCT GTACATCACA GCTCTTACCG TCGGTACCTT GATCGCCCTG
CTCTGGCTGG TCTTCGCCAC CCGCAAGGGC GAGGCCAAGG GAACCACCGA AAAAACCATG
GGCCACTCCT ACGATGGCAT CGAGGAGTAC GACAACCCGC TGCCGAAGTG GTGGTTCATG
CTGTACATCG GCACCATCGT CTTCTCCGTC GGCTACCTGG TCCTGTACCC GGGCCTGGGC
AACTGGAAAG GCGTGCTGCC GGGCTACGAG GGCGGCTGGA CCCAGGACAA GCAGTGGGAA
CGCGAGATGA ACATCGCCCA GGAGAAATAC GGGCCGATCT TCGCCAAGTA CGCCGCCATG
CCCATCGAGG AAGTGGCCAA GGACGAGCAC GCCATGAAGA TGGGCAGCCG CATGTTCGCC
ACCTACTGCT CGATCTGCCA CGGTTCCGAC GCCAAGGGCG CCCTCGGCTT CCCCAACCTG
GCCGACAACG AGTGGCGCTG GGGCGGTGAC CCGCAGAGCA TCGAGACCAC CATCCTCGGC
GGTCGCCACG CGATCATGGC GGCCTGGGGC GATATCCTCG GCGAGGACGG GGTGAAGAAC
GTCGCCGCCT ACGTCCGCAC CGAGCTCGCC GGACTGAAGC TGCCGGAAGG CACCAAGGCC
GACGTCGAGG CCGGCAGGCA GATCTTCTCG GTCAACTGCG TCGCCTGCCA CGGCCCGGAA
GGCAAGGGTA CCGCCCTGGT CGGCGCGCCG AACCTGACCA ACCCCGGCGC GTTCATCTAC
GGCTCCAGCT ACGCCCAGCT GCAACAGACC ATCCGCCACG GCCGCCAGGG CCAGATGCCG
GCCCAGGAAC CCTACCTGGG CAAGGAAAAG GTGCACATCC TGGCCGCCTA CATCTACAAC
CTGTCGCACA ACCAGGGCGC CAACTGA
|
|---|
| Protein sequence | MTTFWSLYIT ALTVGTLIAL LWLVFATRKG EAKGTTEKTM GHSYDGIEEY DNPLPKWWFM
LYIGTIVFSV GYLVLYPGLG NWKGVLPGYE GGWTQDKQWE REMNIAQEKY GPIFAKYAAM
PIEEVAKDEH AMKMGSRMFA TYCSICHGSD AKGALGFPNL ADNEWRWGGD PQSIETTILG
GRHAIMAAWG DILGEDGVKN VAAYVRTELA GLKLPEGTKA DVEAGRQIFS VNCVACHGPE
GKGTALVGAP NLTNPGAFIY GSSYAQLQQT IRHGRQGQMP AQEPYLGKEK VHILAAYIYN
LSHNQGAN
|
|---|
| |