| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3742 |
|---|
| Symbol | |
|---|
| ID | 5356231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 3878862 |
|---|
| End bp | 3880544 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640812792 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001349096 |
|---|
| Protein GI | 152989080 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.883505 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCGA AAAAATGCCT CGCATCCCTG ATTGATTCTT TGGGGGAGCA TGCCAACATC
CGAGAAACCA TCGGGCAAAT CGACATTTCC GGGCATGTCT CTCCTGAAAA ATCGGACGAT
TTCAAGCAGG CCTTCAAAGA TTTCTCGGAA AAGAAATCTG AGGCTTGGTC GATTTCTATC
CGTGATGGCG AATTTTCCGA GATCTCCACA GATGCCATTG CGAATGAGGA TGTCACCCTT
GTAATCAAGA AGCCAATAGG AGGCAGGATT TTCTTTGCGT CACTAGCAGG ATTCTCGGCA
GCCTTGGAAG ACAAGGCGCT GACATTGGCT AGCGAGCTAT TGGTGCTAAG TTCTTTTAAT
GGATTCAAAA CCAGAGGATT TTCTGTCCTG CCTTGGGATG GTGAACCTTT GCCTGGCTTG
CCGTGCTTGG AGCCTGATTC AGATGCAATC GACCCTAGAA AAGGCGTAGT ACGAGACTTG
ACCGGCAACA CTGTTCCGGC AGACCCCTAT CGTTGGATAC TAGTAGGTCA TGACGGCGGC
GGCGAGCCGT GGAATATATG GAAGACTCTG GCAACTAAAA ATCTGGCAAC ACTACTTGTT
TCGGATGTCT GGAAAGAAGA TACAACGAAA GTATCCATCA ATGGCGCGAG AAAGCGCACT
TTCTCACTCG GAGAAAAATG CCAGGATAGC AACGCTTACT CGAAAATATG CCAAGCTGCC
GATTGGATAC TTGTAAAGCA GGACACGGAA GCCCGGCATG AAGTTCTTGT GCGACGTCTT
TCTTCGATTG TCAGAGACTC CGACTCCAAT GGAGTCGCGG AGTGGCTAAC CGTATTGCCT
GAATCTCTGC AAGAAGCCCT TGATGGGGCT CGGCTTGATC ATCGCGCCTA TGTGAGATCA
AAGTCAGCAG AAACGGTAAA AGCTATGGCC GACCTCAGAA AGGCGGTTGG AGAAGATGTT
TCGCGTATCG TAGAGCGCAT TCATAGACTT TCTGCAGGTT TTGTGATTGG TCTGGCTGCA
CTGGCAACGG GGCTAGGTGT CCGCCTTACA TTGCTGACCT CTCAGAAGAA CACCTGGGCA
GTTGCTGGGA TAATTTTCTG CTGCGTCGTA CTAGCGATTA CATGGGCAAG CATTGTTCTT
CAGCATCATG TTAGCTCTAA ATCATTGGTA AATGAGTTGC GCAACATGAG GCGTTGGCAT
AAAAACATTC ACATAGCACT AACCCGGTCG GACTATCGAG AGTTGGCATT ACATCCGGTG
CTTGATGCCA TTCGCCTATA TAAGAAAACA GCGAAGTCCA CCATTAATGG AATGATTGCC
GCTTCATTTG TTTTTATTGC CCTTTTTATT ATTACCCCTT TTTTCTACTC GGCAGAACCT
GTTGGCGCCA ATGATAAAAA TAGGGAGTCG CAATCATTAC TTAATTCTGA CATTGAAGAG
TCGGCTTTAA AAGTTAGCCC TACCCAGAGA GAGGGCAGAA ATTTGGAAGT AGCTCCCCCT
ACAGGGCAAG AGTCAAATTC AGAAGACGAC AAAGCCGTAC AAGATACGAG CATTCTTGAT
GATAAGCAGA GCAGCTCTTC CCAAGATGTA TTTGAGGCCG GAGAAAAGGG CCGAAGCCCC
GAAAATTATA TTAGCCCTCG CTCGGCGAAC GACACCGTTC CTACACCCGC TACGATCATG
TGA
|
|---|
| Protein sequence | MNSKKCLASL IDSLGEHANI RETIGQIDIS GHVSPEKSDD FKQAFKDFSE KKSEAWSISI
RDGEFSEIST DAIANEDVTL VIKKPIGGRI FFASLAGFSA ALEDKALTLA SELLVLSSFN
GFKTRGFSVL PWDGEPLPGL PCLEPDSDAI DPRKGVVRDL TGNTVPADPY RWILVGHDGG
GEPWNIWKTL ATKNLATLLV SDVWKEDTTK VSINGARKRT FSLGEKCQDS NAYSKICQAA
DWILVKQDTE ARHEVLVRRL SSIVRDSDSN GVAEWLTVLP ESLQEALDGA RLDHRAYVRS
KSAETVKAMA DLRKAVGEDV SRIVERIHRL SAGFVIGLAA LATGLGVRLT LLTSQKNTWA
VAGIIFCCVV LAITWASIVL QHHVSSKSLV NELRNMRRWH KNIHIALTRS DYRELALHPV
LDAIRLYKKT AKSTINGMIA ASFVFIALFI ITPFFYSAEP VGANDKNRES QSLLNSDIEE
SALKVSPTQR EGRNLEVAPP TGQESNSEDD KAVQDTSILD DKQSSSSQDV FEAGEKGRSP
ENYISPRSAN DTVPTPATIM
|
|---|
| |