| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3301 |
|---|
| Symbol | |
|---|
| ID | 5355530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 3415587 |
|---|
| End bp | 3417320 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640812353 |
|---|
| Product | putative two-component sensor |
|---|
| Protein accession | YP_001348662 |
|---|
| Protein GI | 152985166 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.15238 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGGC CCTCTGAGCG ACAGCAGGAG GCCCTGGCCG GATTGCTCGG CCTGGGCAGC
CACTCCGCGC GCAAGAGCCA CTACCCGGAG CTGCTGGCGC GCCTGGAGGA ACTGGAGGCG
GAGCGCAACC GCTACAAGTG GCTGTTCGAA CACGCCGTGC ACGGCATCTT CCAGGCCAGC
CTCGGCCACG GCCTGCGCGC CGCCAATCCG GCGTTGGCGC AGATGCTCGG CTACGACGAT
CCGCAACAGG TGCTCTGGTC GCTGGAGGAC ATGGCCGGGC AGTTGTTCGT CGGCGGTGAG
GCCGAGATGC GGCGGATCCG CACGCTGCTG CGCGAGCGCG GCGGCCTGTT CGGCTACGAG
ACGCGCCTGT GGCGCAAGGA TGGCAGCCAT ATCGAGGTGT TGATGAACCT GCTGCTCAGG
CACGACGAAG AGGAACTGGT CGAAGGCTTC GTCGCCGACA TCACCGAGCG GGTCCAGGCC
CAGCAGCGCC TGCAGAGCAT GAACGAGGAA CTGGAGCGGC GGGTGGCCGG GCGTACCCGC
GAGCTGGAAG AGCTCAATCG CCAGTTGCGC CAGGCGCGCG ACGCCGCCGA GGCCGCCAAC
CACAGCAAGG ACAAGTACCT CGCCGCCGCC AGCCACGACC TGCTGCAACC GCTCAATGCG
GCGCGCCTGC TGGTCGATAC CCTGCGCGAG CGTGGCCTGC CGGCCGCCGA GCTGCAACTG
GTGGAGCGTA CCCATCTGGC GCTGGAGGGC GCCGAGACGC TGCTCACCGA CCTGCTGGAG
ATCGCCCGGC TCGACCAGAG CGCGATCCGT CCGGAGCTGG ACGACTACTC CCTGGACGAA
TTGCTCGGGC CGCTGGTTTC CGAATTCGAG GAAGTCGCGC GGGCCTCCGG CCTGGCGCTG
CGCGCGCGGA TTCCCCGGCT GGCGGTGCGC ACCGACGCGC GCCTGCTGTC GCGGATCCTG
CGCAACTTTC TCAGCAACGC CTGCCGCTAT ACCGAGCGTG GCGCCGTACT GCTGGGCGCG
CGCCGGCGTG GCGGCAACGT GCGCCTGGAG GTCTGGGACA GTGGCCGGGG CATTCCCGCC
GACCAGTTGC AGGCGATCTT CCTCGAGTTC AACCAACTGG ACGTCGGCCG GGCTTCCGAG
CGCCGTGGCG TCGGCCTGGG CCTGGCCATC GTCGACCGGA TCGCCGGCAT CCTCGGCTAT
CGCATCGAGG TGCATTCGAT TCCCGGCCGA GGCTCGCTGT TCGCCATCGA GGTGCCGGTG
GTCCGCGAGC CATCGCGGCC AGCGCCCGGC GAGGCGCCGG CGCGGATGTC TGCCGGCGAT
CCGCTGCCGG GAAGGCGGCT GCTGGTGGTG GATAACGAGA CCGAGATTCT CTTCAGCATG
GCCGCGCTGC TCGGCCAGTG GGGCTGCGAA GTGCTCACCG CCAGCGACCT GGAAAGCGCC
CGGCGGGTGC TCGGCGGACG CGCGCCCGAC GTGATCCTCG CCGATTACCA TCTCGATCAC
GGCGCCACCG GCTGCCAGTT GCTGGGCGCG TTGCGCGGGG ACTACGGCGC CGCTATCCCG
GCGGTGATGA TCACCGCCGA CCGCAGCGAC GACTGCCGTC GCGCGCTGAA TCGACTGGGC
GTGCCGCTGC TGAACAAGCC GCTGAAGCCC GGCAAGCTGC GTGCCGCCCT AAGCGCCTTG
CTCGGCGAGG CCCAGGGCGC TCCCCGCGGC GCCGGAGACG GTGGCAGGCC CTAG
|
|---|
| Protein sequence | MARPSERQQE ALAGLLGLGS HSARKSHYPE LLARLEELEA ERNRYKWLFE HAVHGIFQAS
LGHGLRAANP ALAQMLGYDD PQQVLWSLED MAGQLFVGGE AEMRRIRTLL RERGGLFGYE
TRLWRKDGSH IEVLMNLLLR HDEEELVEGF VADITERVQA QQRLQSMNEE LERRVAGRTR
ELEELNRQLR QARDAAEAAN HSKDKYLAAA SHDLLQPLNA ARLLVDTLRE RGLPAAELQL
VERTHLALEG AETLLTDLLE IARLDQSAIR PELDDYSLDE LLGPLVSEFE EVARASGLAL
RARIPRLAVR TDARLLSRIL RNFLSNACRY TERGAVLLGA RRRGGNVRLE VWDSGRGIPA
DQLQAIFLEF NQLDVGRASE RRGVGLGLAI VDRIAGILGY RIEVHSIPGR GSLFAIEVPV
VREPSRPAPG EAPARMSAGD PLPGRRLLVV DNETEILFSM AALLGQWGCE VLTASDLESA
RRVLGGRAPD VILADYHLDH GATGCQLLGA LRGDYGAAIP AVMITADRSD DCRRALNRLG
VPLLNKPLKP GKLRAALSAL LGEAQGAPRG AGDGGRP
|
|---|
| |