Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3141 |
Symbol | glgA |
ID | 5355062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 3249719 |
End bp | 3251260 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640812192 |
Product | glycogen synthase |
Protein accession | YP_001348501 |
Protein GI | 152987786 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0297] Glycogen synthase |
TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.335952 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGACATT CTGTTGCAGG CGTCTGCCTG GAAGAACCCG CGGTACTGAC CGCCTTTCCG TCGCTGCTGC ACCCGCAGGA CCCGCCGCAA CAGAGGGACC GAATACTCTT CGTCACCGCC GAGCTCAGCG ACTTCGTCAA GGTCGGCGGG CTCGGCGACT TTTCCGCCGC CCTGCCCCGG GTGCTCAGGC GCCAGCATGC GGTACGGGTC CTGCTGCCCG GCTACCGCCA GGTGCTGGAG CGCTGCAGTG ACCTGCGAAT CCTCGGCAGC CTGCCGGGCC GCGCGGCGAT CCCGCCGTGC GAGATCGGCC TGGTGACCCT CGACGACGGC CTGGAGGTGA TGCTGGTGCT CTGCCCGTTG CTCTACGAGC GCGAGGGCAC CCCCTACATG GACGACCAGG GCAACGACTG GGCTGACAAC CACCTGCGCT TCGCCCGCCT CTGCCTGGCC GCCGCCGAGA TCGCCGGCGG TCACGGCGCC CAGGGCTGGC AGCCGGGCCT GGTGCACGCC AACGACTGGC CGTCGGCGCT GACCCCGGCC TACATGGCCT GGAACGGTGT GCGCACGCCG AGCCTGTTCA CCATCCACAA CCTCGCCTAC CAGGGCCTCT GCGACCTGCA GTGCAGCGCC GAACTGGGCC TGCCCGACGA AGCGCTCAGC CCCGAGAGCA TGGAGTTCCA CGGGCGCCTG TCGTTCCTCA AGGCGGGCAT CGCCCATGCC CATCACATCA CCACGGTGAG CGAGACCTAC GCGCAGGAGA TCACCACCCC GGAATACGGC TGCGGCCTGC ACGGCATCCT CAAGTGCAAG GTCGAGAAGC GCCAGCTCAG CGGCATCGTC AACGGTATCG ATGACAGCTG GCAGCCGCAT TGCGATCCGC ACCTGGTGGC CGGCTTCAGC GCCCGCCAAT GGGCCGGCAA GCGCGCCAAC ACACGCTATG TCGAGGAGCG TTTCGGCCTC GAGCCGGGCA AGGGGCCGCT GTTCGCGGTG GTCTCGCGGC TGGTGCAGCA AAAGGGTATC GACCTGACCC TGGAGATCAG CGACGCCCTG CTCCAGGCCG GTGGCCGGCT GGTCAGCATC GGGCGCGGTG AACCGTCGCT GGAGAAGGCC ATGCTCGATC TCTCGCGGCG TCATCCGGGC CAGGTCGGCG TGCACATCGG CTTCGACGAG ACCGACGCGC GGCGCATCTA TGCCGGCAGC GACTTCCTGC TCATGCCATC GCGCTACGAG CCTTGCGGCC TGAGCCAGCT CTACGCGCAA TGCTTCGGCT CGCTGCCGAT CGCCCGTTGC ACCGGCGGGC TCGCCGACAC CATCGTCGAC GGCGTCACCG GCTTCCTGTT CCGCGAGGAA ACCGCGCAGA GCTATCTGGA TGCGGTGCTG CGCGCGATCA ACGTCTACCA TTGCCCCGCT CTGCTCAATG CCATGCGCTG CAAGGCGATG GCCGCGCCGA TGTTCTGGCG CGACTCGGTG GAACCCTACA ACCGCCTCTA CCGGCGCCTG CTGAGGAATA CCGCGCCGGC CTGGCGCGGG GTGCGCCCGT GA
|
Protein sequence | MGHSVAGVCL EEPAVLTAFP SLLHPQDPPQ QRDRILFVTA ELSDFVKVGG LGDFSAALPR VLRRQHAVRV LLPGYRQVLE RCSDLRILGS LPGRAAIPPC EIGLVTLDDG LEVMLVLCPL LYEREGTPYM DDQGNDWADN HLRFARLCLA AAEIAGGHGA QGWQPGLVHA NDWPSALTPA YMAWNGVRTP SLFTIHNLAY QGLCDLQCSA ELGLPDEALS PESMEFHGRL SFLKAGIAHA HHITTVSETY AQEITTPEYG CGLHGILKCK VEKRQLSGIV NGIDDSWQPH CDPHLVAGFS ARQWAGKRAN TRYVEERFGL EPGKGPLFAV VSRLVQQKGI DLTLEISDAL LQAGGRLVSI GRGEPSLEKA MLDLSRRHPG QVGVHIGFDE TDARRIYAGS DFLLMPSRYE PCGLSQLYAQ CFGSLPIARC TGGLADTIVD GVTGFLFREE TAQSYLDAVL RAINVYHCPA LLNAMRCKAM AAPMFWRDSV EPYNRLYRRL LRNTAPAWRG VRP
|
| |