Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3110 |
Symbol | |
ID | 5355235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3226426 |
End bp | 3226980 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640812161 |
Product | hypothetical protein |
Protein accession | YP_001348470 |
Protein GI | 152985368 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00654762 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCAAGC AGCACATCAT CCATTTTACC GGACCGATCA ATTCGTCCAC CTGCGGCAAC CTGATCAATA CCTGCGCGAA AGCCCTGCAA CAGGAAGCCG AGGAATTGCG GATCAACATC GCCACCATGG GCGGGGAGTG CAGCTACGGC TTCACCCTGT ACAACTTCCT GCGCGCGCTG CCGGTCCCGG TCCATACCCA CAACCTGGGT ACCGTCGAAT CGATGGGCAA CATCCTGTTC CTCGCCGGCG AGCGCCGCAG CGCCTGCGCC CACAGCAAGT TCCTGTTCCA CCCGTTCCAC TGGACCCTGC ATGGCGCGGT GGACCACGCG CGGATGGCGG AATACGCGAT GAGCTTGGAC TACGACCTGC AGCTGTACGC GCAGATCGTC GCCGAGCACA CCCGCGACGC CCCCGAGCGC CTGGACATCC CGCGCTACCT GATGGCCTAC CCGCGGATCC TCGGTCCCGA CGACGCGCTG GCCTGCGGGC TGATCCAGAG CGTCGACGAC TCGCCGATAC CCGCTTCCGC CTGTCACTGG AGCGTGCACT CCTGA
|
Protein sequence | MSKQHIIHFT GPINSSTCGN LINTCAKALQ QEAEELRINI ATMGGECSYG FTLYNFLRAL PVPVHTHNLG TVESMGNILF LAGERRSACA HSKFLFHPFH WTLHGAVDHA RMAEYAMSLD YDLQLYAQIV AEHTRDAPER LDIPRYLMAY PRILGPDDAL ACGLIQSVDD SPIPASACHW SVHS
|
| |