Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3093 |
Symbol | |
ID | 5353646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 3207933 |
End bp | 3209078 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640812144 |
Product | transport protein |
Protein accession | YP_001348453 |
Protein GI | 152983597 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.935055 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCGGC GCCTGATGTA CAGCGTCCTG CTCGGTCACT ACCTGTCGGC GTTCACCGCC CTCGGCGTGC CCCTGTTCCT GCCGCGGATC CTCGCCGACC TGGCGCCGGG CACGCCGGGC TGGGCCATCG GCGTGCTGTT CGTCCTGCCG ACCCTGTGCA CCGCGCTGGC GGCCCCGTTC TGGGGCCGCC TGGCCGACCG CCACGGGTGC CGGCTGTCCC TGCTGCGGGC ACATGCGGGA CTGGCGCTCG GCTTCCTGCT GGCCGGGCTG AGCCCCAACC TCTGGACGTT CGTCCTCGCC CTGGTGATCC AGGGCAGCTT CGGTGGCGCC ATGGCTGCCT CCAACGCCTA CCTGGCGACC CAGCTGGACG ACGGCGAGCT GTCGCGCGCA CTGAACTGGA CCCAGTACTC GGCGCGCCTG GCGATGATCA GCGGACCGGT CCTGCTCGGC CTGCTGACCG CCAGCGGCAT GGGCCAGGAA CTCTACCGGG TGCTGGCCTG GCTGCCGTTG CTGGCTTTCG TGCTGATCCT CCCGTTGCCT GCCGATCATG GCCGCCAGCG GGCCTCCGGG AGTGCCGGGG AAGCCGGTGC GGGCGCTCTG CCGGGCGACC TGGCGCGGCT GCTCGCCGTG CAGTTCCTGT TCTGTTTCGC GATGGTGCTG GGCTTCCCCT ACTTCGTTCC CTATGGCGAG GCCCTGGGCC TGCGCAACGA CGCTCTCATC GGCCTGTTCT ACGCGCTGCC GCACCTGGTC TACCTGGTGG CCCTGCCGCG CCTGCAGCGC TACCCCGCCA ACCTGTTGCT GCCGGGGCTG GGGCTGTTCG CCCTGGGCAA CTTCCTGCAG TTCGGCGCCG GCCAACCGCT GTCGCTGTTC GCCTGGCGCC TGCTCGCGGG GCTCGGCATG CTGCTCGCCT TCATCGGCCT GCATCGCTGT CTCAGTCAGC GCCGCCGCCA TGGCAGCGCC GGACGGCTGT TCGCCTGGTT CGACTCCAGC GGCAAATGGG CCGGCGCTGC CGCGGGTGCC GCGGCCGGCC TGGCCAGCCA GCACTACGGC ATCGCTTCAC CGTTCCTGGT CGCCGGCCTG GCCGCTTTCG CGGCGCTGTG GCTGGCGCGT CCCCTGCTCG TCGCTCCTCG GGAGATCACC GCATGA
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Protein sequence | MSRRLMYSVL LGHYLSAFTA LGVPLFLPRI LADLAPGTPG WAIGVLFVLP TLCTALAAPF WGRLADRHGC RLSLLRAHAG LALGFLLAGL SPNLWTFVLA LVIQGSFGGA MAASNAYLAT QLDDGELSRA LNWTQYSARL AMISGPVLLG LLTASGMGQE LYRVLAWLPL LAFVLILPLP ADHGRQRASG SAGEAGAGAL PGDLARLLAV QFLFCFAMVL GFPYFVPYGE ALGLRNDALI GLFYALPHLV YLVALPRLQR YPANLLLPGL GLFALGNFLQ FGAGQPLSLF AWRLLAGLGM LLAFIGLHRC LSQRRRHGSA GRLFAWFDSS GKWAGAAAGA AAGLASQHYG IASPFLVAGL AAFAALWLAR PLLVAPREIT A
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