Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_2609 |
Symbol | |
ID | 5354604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 2629589 |
End bp | 2630617 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640811660 |
Product | HTH-type transcriptional regulator VqsM |
Protein accession | YP_001347972 |
Protein GI | 152984802 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.518674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAGT CCGAGAACAT CCAGTACGAC TTCGAGTGGC GACCACTCAG CAACTACCTC GCCGTGCAAC GCATCGTCCC GCCGGACCTC CACCAGCCCC TCGGAACCGT CCCCCGATTG CCCAGCGAGG CGCTCTACGA ATGGATAGTC CTGAATGCCC GTTCGCCCCT GGAAGGACTC AGCCTGGGAG AGCACTACCG CCTTTCCGAC TACGGCGTCG CGGGCCTGGC CCTGCAAAGC GCCGGCACCG TGGCAGAAGC CCTGCAACTG GTCAGGACCA ACATGCTGCT GTTCAACCGG GACGTCAGCG GCATCGAGGT GAAACGCTCC AGTTGCGATA CCGTCGACGT GGACATCCAT CTGCAGACCA GACCGGACTG GCCGGCGCCG GCACGCATCT ATCATGCGAA TGTCCTGGCG TCGGCGGCCT ACGCGCTGTT CCGCGACCTG CTGCTGGGCG ACCTGGAACT GGTCCGTCTG CGCTTGCCGG AGCGACCCGG CGAGGCAACG CCATACGAGG AATATTTTCG GGTACCGGTG TATTTCGCTG GCGCGGGCAT CACCTTCACT CTTCCGGCGG ATCTGCTCGA AACCCGCATC GCCACCGCCA ACGCCGCGGT CTTCCAGGCC TCCCTGGCGC TCAGCAGCGA AACCTTCAAC ATCCGGGTCG CCCGGGAAAT GGGCGGTTAC CGGCAGCGCA TCGTGTCGCT GCTGGAGTCG CTGCAGGACC GCTATCCGAA CATTGCCTGG GTCGCCCGAC AATTGAGGGT CACCGAAAGA ACGCTGCGCC GGCGGCTCGC CGAAGAGGGC ACGACCTACA GGGCGGTGCT CGACCTGGTA CGCCGGGACA GGGCCCGGCA ACTGCTCCGG AACGAATGCC TGCGCATCGA GGATATCGCC GAGAGACTCG GCTACATGGA CACCTCCAGC TTTCGCCATG CCTTCCGTCG CTGGACGGGA CAATGTGCCA ACGATTATCG CCAGGATCAC ACCCAGCCCC GGGCAGTGCG CCGCAAGGGC GAGCGCTGA
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Protein sequence | MSQSENIQYD FEWRPLSNYL AVQRIVPPDL HQPLGTVPRL PSEALYEWIV LNARSPLEGL SLGEHYRLSD YGVAGLALQS AGTVAEALQL VRTNMLLFNR DVSGIEVKRS SCDTVDVDIH LQTRPDWPAP ARIYHANVLA SAAYALFRDL LLGDLELVRL RLPERPGEAT PYEEYFRVPV YFAGAGITFT LPADLLETRI ATANAAVFQA SLALSSETFN IRVAREMGGY RQRIVSLLES LQDRYPNIAW VARQLRVTER TLRRRLAEEG TTYRAVLDLV RRDRARQLLR NECLRIEDIA ERLGYMDTSS FRHAFRRWTG QCANDYRQDH TQPRAVRRKG ER
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