| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2320 |
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| Symbol | |
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| ID | 5356138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 2375062 |
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| End bp | 2376696 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640811372 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001347690 |
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| Protein GI | 152984042 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0793665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCGT TCAGCCCCCC GCTCGCCCAG GCGACGCCGT CCACACCAAC CGCCCCGGTC
GCGCAGGCGA CGCCGTCCAC ACCAACCGCC CCGGTCGCGC AGCCGTTCGG CGCGCGCATC
GTCATCGGCC TGCTCGGTGT CCTGCTCGCC TCGCTCAGCG CCGGCCTCAA CGGCCATGTC
ACCGAGATCG CCATGACCGA CGTGCGTGGC GCCCTCGCCA TCGGCCATGA CGAAGGCACC
TGGCTGACCG TCCTCTACGA GGCCACCCAG GTCGCCGCCA TGGCTTTCGC GCCCTGGTGC
TCGGTGACCT TCTCGCTGCG CCGCTTCACC CTGTTCGCCA TCGGCGGCTT CGCCCTGCTG
GCGCTGCTCT GCCCGTTCGC ACCGAACCTC GAGAGCCTGC TGGCACTGCG TACCCTGCAG
GGACTGATGG CCGGCTGCCT GCCGCCGATG CTGATGACCG TGGCGCTGCG CTTCCTGCCG
CCGGGCATCA AGCTCTACGG CCTGGGGGCC TACGCCCTCA CCGCCACCTT CGGGCCCAAC
CTGGGCCTGC CGCTGGCGGC GTTCTGGTTC GAATACGTCG GCTGGCAGTG GGTATTCTGG
CAGGTCATTC CGCTGTGCCT GGTGGCGATG GCCGCGGTGT CCTACGGCAT TCCGCAGGAC
CCGGTGCGCC TGGAGCGCTT CCGCCAGTTC GACGGGATCG GCCTGCTCAC CGGCTTCCCG
GCGATCTGCG CACTGGTGAT CGGGCTGCTC CAGGGCGAAC GCCTGGACTG GTTCGAATCG
CCGCTGATCG GCCTGCTGCT GGGCGGCGGC AGCCTGTTGC TGGTGCTGTT CCTGGTCAAT
GAATGGAGCC ACCCGCTACC GTTCTTCCGT CTGCAATTGC TGAAACGGCG CAACCTGACC
TTCGCCCTCA TCACCCTGGC CGGCGTGCTG GTGGTGCTCG GCGCGAGCCT GGGCGTGCCG
ACCGAGTTCC TCGCCGAGAT CCGCGGCTAT CGCCCCCTGC AAAGCGTACC GATGGTGCTC
CTGCTGGCCC TGCCGCAGCT GGTCGCGCTG CCGCTGGTGG CGGCGCTGTG CAATATCCCG
CGGGTCGACT GTCGCTGGGT GCTGGCCTGT GGCCTGTGCC TGTGCGGCGG TGCCTGCCTG
AGCTTCAGCC AGCTGACGGC GGACTGGGTG CGTGAGGATT TCTACCTGCC GATGCTGTTG
CTGGTGGTCG GCCAGCCGAT GGCGGTGATT CCGCTGCTGA TGCTTTCCAC CAGCGTCATC
GCGCCCATCG AGGGGCCGTT CGCCTCGGCC TGGTTCAACA CCGTCCGCGG CTTCTCGGGG
GTAGCCGCCA CCGCGGTAAT CGGCGCCCTC GGCACCGCCC GCGAGCACTA TCACTCCAAC
CGCCTGGTCG ATCACCTGGG CAATGCGTCC CAGGCTGTCG AACTGCGCCT GCAACAGATC
GCCGGCCTGC AACCGGGCGC CGACTCCGCC GCGCACTGGC AGCACCTGGC CGAACAGGCC
CGCCAACAGG CCCAGGTGCT GGCCAACGCC GACGTGCTGA TGGCGATGGC CGGCCTGGCC
TGCGCCCTGC TGATCCTGAT TCCGATCCTG CCGCAACGGG CCTATCCGCC CCGCCCGGTC
GCTCCCACAC ACTGA
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| Protein sequence | MTSFSPPLAQ ATPSTPTAPV AQATPSTPTA PVAQPFGARI VIGLLGVLLA SLSAGLNGHV
TEIAMTDVRG ALAIGHDEGT WLTVLYEATQ VAAMAFAPWC SVTFSLRRFT LFAIGGFALL
ALLCPFAPNL ESLLALRTLQ GLMAGCLPPM LMTVALRFLP PGIKLYGLGA YALTATFGPN
LGLPLAAFWF EYVGWQWVFW QVIPLCLVAM AAVSYGIPQD PVRLERFRQF DGIGLLTGFP
AICALVIGLL QGERLDWFES PLIGLLLGGG SLLLVLFLVN EWSHPLPFFR LQLLKRRNLT
FALITLAGVL VVLGASLGVP TEFLAEIRGY RPLQSVPMVL LLALPQLVAL PLVAALCNIP
RVDCRWVLAC GLCLCGGACL SFSQLTADWV REDFYLPMLL LVVGQPMAVI PLLMLSTSVI
APIEGPFASA WFNTVRGFSG VAATAVIGAL GTAREHYHSN RLVDHLGNAS QAVELRLQQI
AGLQPGADSA AHWQHLAEQA RQQAQVLANA DVLMAMAGLA CALLILIPIL PQRAYPPRPV
APTH
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