| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2163 |
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| Symbol | nqrD |
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| ID | 5354460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 2221027 |
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| End bp | 2221698 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640811216 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit D |
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| Protein accession | YP_001347535 |
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| Protein GI | 152988406 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.971219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCTC AACCCACGAT CCGCGAAGTC CTGTTCAATC CGGTCTTCCA GAACAACCCG
ATCGGCCTGC AGATCCTCGG CATCTGCTCG GCGCTGGCGG TGACCTCGAA CCTGAAGACC
GCCACCGTCA TGGCCATCGC CCTGACCCTG GTGACCGGCT TCTCCAACCT GTTCATCTCG
ATGATCCGCC GGCAGATTCC CAGCTCGATC CGGATGATCG TGCAGATGGT GATCATCGCC
TCGCTGGTGA TCGTCGTCGA CCAGGTGCTC AAGGCCTATG CCTACAGCCT GAGCAAGCAG
CTCTCGGTGT TCGTCGGCCT GATCATCACC AACTGCATCG TGATGGGCCG CGCCGAAGCC
TTCGCCATGG CCAACCCGCC GCTCGTGTCG TTCTTCGACG GCATCGGCAA CGGTCTCGGC
TACAGCGCCA TGCTGCTGGT ACTGGGCTTC ATCCGCGAGC TGTTCGGCGC CGGCAAGCTG
TACGGCATCA GCGTGTTGCC GACGGTCAAC GATGGCGGCT GGTACCAGCC GAACGGCCTG
CTCCTGCTGC CGCCCTCGGC GTTCTTCCTG ATCGGGCTGA TCATCTGGGC CCTGCGCACC
TGGAAGAAAG ACCAGGTCGA GGCACCGGCC TACAGGATGG CCCCGCAGGT ATCCAGCAAG
GAGGCGTACT GA
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| Protein sequence | MAAQPTIREV LFNPVFQNNP IGLQILGICS ALAVTSNLKT ATVMAIALTL VTGFSNLFIS
MIRRQIPSSI RMIVQMVIIA SLVIVVDQVL KAYAYSLSKQ LSVFVGLIIT NCIVMGRAEA
FAMANPPLVS FFDGIGNGLG YSAMLLVLGF IRELFGAGKL YGISVLPTVN DGGWYQPNGL
LLLPPSAFFL IGLIIWALRT WKKDQVEAPA YRMAPQVSSK EAY
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