| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2158 |
|---|
| Symbol | |
|---|
| ID | 5357737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 2214542 |
|---|
| End bp | 2215990 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640811211 |
|---|
| Product | glyceraldehyde-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_001347530 |
|---|
| Protein GI | 152987117 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.634388 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTCAGA AGCCCGACCA GTGTCTCGGT GAATGGATCG ATCGTGAAGC CATCGCGGAA
GCCATGATCC CGCTGATTGG CCAGCTCTAC CGCAACAACA ATGTGGTGAC TTCGATCCAT
GGCCGTGGTC TGATCAACCG CTCGGTGATC GCGATCATGA AGGCGCATCG TTTCGCCCGT
CATCGCATGG CCGACGACGC CGAGCTGTCG GTTCACGAGA CGTTCCCGAT CCTCAAGGCG
ATGAGCGAGC TCAAGCTGGG CGCCGCTTCC GTCGACCTGG GCAAGATGGT CGCCAAGTTC
AAGGCAGAAG GTAACGGCCG CAGCATCGAG GACTTCGTCA AGGCCGAACT GGCCGAGGTG
GTCGGCAAGC AGAACGGCGA CGCCCGCGAA GGCACCGACG TCGTGCTCTA CGGCTTCGGC
CGGATCGGCC GCCTGCTGGC GCGCATCCTG ATCGAGAAGA CCGGCGGTGG CGACGGCCTG
CGCCTGCGCG CGATCGTCGT CCGCAAGGGC GCCGAGAACG ACCTGGTCAA GCGTGCCAGC
CTGCTGCGTC GCGACTCCGT GCACGGGCCG TTCGATGGCA CCATCACCAT CGACGAAGAA
AACAACACGC TGACCGCCAA CGGCAACCTG ATCCAGGTAA TCTATTCCAA CGACCCGGCG
TCGATCGACT ATACCCAGTA CGGCATCAAG AACGCCCTGC TGGTCGACAA CACCGGCAAG
TGGCGCGACG CCGAAGGCCT CGGCCAGCAC CTGAAGTGCC CGGGTATCGA TCGCGTGGTC
CTCACCGCCC CGGGCAAGGG CGCGCTGAAG AACATCGTGC ATGGCATCAA CCACGCCGAC
ATCGGCGCCG ACGACAAGAT CATCTCGGCC GCGTCCTGCA CCACCAACGC CATCGTGCCG
GTGCTGAAGG CCGTCAACGA CCAGTACGGC ATCGTCAACG GCCACGTCGA GACCGTTCAC
TCGTACACCA ACGACCAGAA CCTGATCGAC AACTTCCACA AGGGCAGTCG TCGTGGCCGC
AGCGCGCCGC TGAACATGGT GATCACCGAG ACCGGCGCCG CCACCGCCGC GGCCAAGGCC
CTGCCGGTGC TGAAAGGCAA GCTGACCGGC AACGCGATCC GCGTGCCGAC GCCGAACGTG
TCCATGGCGA TCCTCAACCT GAACCTGGAA AAGGCCACCA GCCGCGAGGA GATCAACGAG
TACCTGCGCC AGATGGCCAT GCACTCGGAC CTGCAGAAGC AGATCGACTT CGTCAGTTCC
CAGGAAGTGG TTTCCACCGA CTTCGTCGGC TCGCGCCATG CCGGCGTGGT GGACGCCGAG
GCGACCATCT GCAACGACAA TCGTGTCGTC CTGTACGTCT GGTACGACAA CGAGTTCGGC
TACAGCTGCC AGGTGGTCCG CGTGATGGAA GACATGGCCG GGGTCAATCC GCCCGCCTTC
CCGCGTTGA
|
|---|
| Protein sequence | MTQKPDQCLG EWIDREAIAE AMIPLIGQLY RNNNVVTSIH GRGLINRSVI AIMKAHRFAR
HRMADDAELS VHETFPILKA MSELKLGAAS VDLGKMVAKF KAEGNGRSIE DFVKAELAEV
VGKQNGDARE GTDVVLYGFG RIGRLLARIL IEKTGGGDGL RLRAIVVRKG AENDLVKRAS
LLRRDSVHGP FDGTITIDEE NNTLTANGNL IQVIYSNDPA SIDYTQYGIK NALLVDNTGK
WRDAEGLGQH LKCPGIDRVV LTAPGKGALK NIVHGINHAD IGADDKIISA ASCTTNAIVP
VLKAVNDQYG IVNGHVETVH SYTNDQNLID NFHKGSRRGR SAPLNMVITE TGAATAAAKA
LPVLKGKLTG NAIRVPTPNV SMAILNLNLE KATSREEINE YLRQMAMHSD LQKQIDFVSS
QEVVSTDFVG SRHAGVVDAE ATICNDNRVV LYVWYDNEFG YSCQVVRVME DMAGVNPPAF
PR
|
|---|
| |