Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1979 |
Symbol | |
ID | 5359754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 2019242 |
End bp | 2020024 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640811032 |
Product | imidazole glycerol phosphate synthase subunit HisF |
Protein accession | YP_001347360 |
Protein GI | 152985579 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit [TIGR03572] glycosyl amidation-associated protein WbuZ |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAAGC CTAGAATAAT TCCTTGCCTG CTCATGCAAG ATGGCGGACT TGTCAAAACC GTACGTTTTA AGGATCCACG GTATATCGGT GATCCGATTA ATGCGGTCAA GATTTTCAAT GAGAAAGAAG CGGATGAGCT GATTATCCTT GACATCGATG CTACCTCGCA GGGTAGAGAA CCTGATTATA AGAAGATTGC TAACCTTGCT GCCGAGTGCC GTATGCCGTT GTGCTATGGT GGAGGTATTC GTAAACCAGA GCAAGCGCGT TTAATTATTT CCCTAGGTGT CGAAAAAGTA GCAATCAGTG CTGCTGCAAT TGAGGACGTA AACTTAATAT CTGAAGTTGC TGAAGAAATA GGTCGGCAAA GTGTAGTCGT TGTTCTAGAC CATAAGCAGC GACTATTGAG CAAACAGCAT GATGTTTGGA CACACAACGG GACACATAAT ACCAAACGCA ATGTCATTGA CGTGGCGAAG CAGATGGAGG ATGCAGGTGC CGGTGAGATC GTGCTCAACT CAATTGACAA CGATGGACGG ATGTGTGGTT ACGAGATAGC GCTTGCCGTC CGTTTACGGG AAGCAGTGAA TGTACCTGTT ACAATACTTG GTGGCGCCGG TTCGCTGAAG GATATGGGGA GCTTGATTGC AGCCTGTGGA GTGGTTGGTG CTGCGGCTGG CAGTCTTTTT GTGTTTAAAG GCAGCTATCG AGCCGTCCTG ATTAACTATC CCAGTTTCCA GCAAAAAAAC GATGTAATAT TTTCGGTACT GAATTCCCGA TAA
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Protein sequence | MLKPRIIPCL LMQDGGLVKT VRFKDPRYIG DPINAVKIFN EKEADELIIL DIDATSQGRE PDYKKIANLA AECRMPLCYG GGIRKPEQAR LIISLGVEKV AISAAAIEDV NLISEVAEEI GRQSVVVVLD HKQRLLSKQH DVWTHNGTHN TKRNVIDVAK QMEDAGAGEI VLNSIDNDGR MCGYEIALAV RLREAVNVPV TILGGAGSLK DMGSLIAACG VVGAAAGSLF VFKGSYRAVL INYPSFQQKN DVIFSVLNSR
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