| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1969 |
|---|
| Symbol | |
|---|
| ID | 5355816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 2003647 |
|---|
| End bp | 2004696 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640811022 |
|---|
| Product | O-antigen chain length regulator |
|---|
| Protein accession | YP_001347350 |
|---|
| Protein GI | 152989505 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3765] Chain length determinant protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATA AGCAGAGTAG TGAAGCGGTT AATTATGAAG TGGATTTTAT GGAGTTGATA
CGTGAGCTCT GGAAAAGCCG GTGGCTTGTT GTTCTAAGTG GGTTCTTTTT AGGGCTTTTA
GCGGCGCTCT ATGCCTATTT AAGTAAGCCT GTCTATGAGG CTCGAGTTAT TGTACTGCCT
CCTTCGTTAA GCAGCGTTGC AGGCTTCAAC CAGGGGCGAA CTAGTGATTC TGGATTGCAG
CCTTTCAAGG TTCAAGACGT TTATTCGGTT TTTATTCGGA ATCTTCAGTC TGATGAATCG
CTTCGCCGAT TTTTTGAGAA TATTTATTTG CCGTCTCTAA CTGATGCAGA ACGGTCAGAG
TCGCGCGAGA AACTTTTTCG CTCCTTCAGT AAGCAGATAA GCATTAGTCT GCCGGATAGA
GCGCAGCCTG ATCGATATTT AATAGTAGCT AGGCAAGGTA ATCCAGAGTT AGCTGCTGAG
TGGGTAAAAA AATATCTTGC CGACGCAGCT GATCGGTCTC TGCAGGAGAT GATGGCTAAT
GCATACCGTG AGATTGAGGT TAAAGCTAGG GATGTTGAAC GACGTATTTA TGTTTTGCGT
GAAACTGCAA AACTGCGTCG AGAGGACCGC ATTACTCAAC TTCGTGAAGC TTTAAAGGTG
GCCGACTCGT TGGGTTTGGA AAGACCTCCA ATAATTAATG ACCAGATGTC TGAGCAGCTC
TCGGCAATAA TGAGCGGTAA TCTTATGTAT ATGCGAGGAA GTAAAGCATT GAAAGAGGAA
ATCCTGGTTC TGGAAGCGCG AACTTCGGAT GATCCTTTTA TTCCAGCTTT AAGGACTTTG
CAGGAGTTGG AGTCGCTATA CAGGGGGCTG AGTATCAAGT CTGAGCAGGT CGCAGTTTTT
CGTCAGGATG GTGTAGTGGA AGTACCTGAT TTCCCCGTGA AGCCAAAAAA GCTATTGATC
TTATTTGGCG GGGTGATGCT GGGAGGGATG CTTGGTATGC TTTTTGTTGT AATTCGATTG
TTTTATAGGC GAAATGCTAA GCTTTCCTAA
|
|---|
| Protein sequence | MSDKQSSEAV NYEVDFMELI RELWKSRWLV VLSGFFLGLL AALYAYLSKP VYEARVIVLP
PSLSSVAGFN QGRTSDSGLQ PFKVQDVYSV FIRNLQSDES LRRFFENIYL PSLTDAERSE
SREKLFRSFS KQISISLPDR AQPDRYLIVA RQGNPELAAE WVKKYLADAA DRSLQEMMAN
AYREIEVKAR DVERRIYVLR ETAKLRREDR ITQLREALKV ADSLGLERPP IINDQMSEQL
SAIMSGNLMY MRGSKALKEE ILVLEARTSD DPFIPALRTL QELESLYRGL SIKSEQVAVF
RQDGVVEVPD FPVKPKKLLI LFGGVMLGGM LGMLFVVIRL FYRRNAKLS
|
|---|
| |