| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1531 |
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| Symbol | potD |
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| ID | 5356452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 1555788 |
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| End bp | 1556849 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640810584 |
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| Product | polyamine transport protein PotD |
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| Protein accession | YP_001346915 |
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| Protein GI | 152988127 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC TGTTGCTCGT CGCAACCCTC ATGGCAGGAG CCGCCCAGGC CACCGCCGCC
GAGAAGCTGT ATCTGTTCAA CTGGAACGAC TACATCGCCG AGGACACGGT GAAACGCTTC
GAGCAGCAAT GTGGCTGCGA GCTGGTGCAG GAGTTCTATT CCGGCACCGA GGAGATGATG
GCCAAGCTGG CCGCCGGGGC CAGCGGCTAC GACGTGATCA TCCCGACCCA GAACGCGGTC
GAGGCTCTGG TCCGCAAGGG CGACCTGGTG GAACTGGACA AGAACCGCCT GGCGAACCTG
AAGAACGAGG ACGCGGGCTA CCTGGACAAG GACTTCGACA AGGGCAACCG CTACTCCGTG
CCCTACGCCT TCACCACCAC CCTGGTCGGC TACAACAAGA CCGAACTGGA CAAGCTGGGC
ATCGACCCGG CCGACTGGTC GGTGATCTTC GACCCGGCGG TCCTGGAGAA GATCAAGGGC
AGGGTCACGG TGATGGACGA CCCGCAGGAA CTGTTCGGCG CCGCCCTGAA GTACCTCGGC
CACTCCGCCA ACGACACCGA CCCGCAGCAC TGGAAGGAAG CCCAGGCGCT GATCCTCGCC
GCCAAGCCGT ACTGGGCCGC GTTCAACTCG TCGAGCTATA TCAAGGAGCT GACCCTGGGC
AACATCTGGG TCGCCCATGG CTACTCCAGC GACATGTACC AGGCCAGGGC CGACGCGGAG
GCTGCCGGCC GCGCCTTCAA GGTCGACTTC GCCCTGCCCC GCCAGGGTGC AGTGCTGGCC
ATCGACAGCA TGGTGATCCA CAAGGGCTCG AGGAACCCCG ACCTGGCCTA CCGCTTCATC
GACTTCATGC TCGACGGTCG GAACGCTTCC GAACTGACCA ACCAGATCGG CACCGGCACG
CCCAACGCCG CCGCCCAGCC CTTCATCAGG CCGGAGATCA GGACGCTCGC CGCCCTCTTC
CCGGACGCCG CCACCCAGGC CAGGCTGGAG CCGCTGAAGG ACCTGAACTC GCGCCAGCGA
CGCGCCCTGA ACAGGCTCTG GACCGAGATC AAGCTGCGCT GA
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| Protein sequence | MKKLLLVATL MAGAAQATAA EKLYLFNWND YIAEDTVKRF EQQCGCELVQ EFYSGTEEMM
AKLAAGASGY DVIIPTQNAV EALVRKGDLV ELDKNRLANL KNEDAGYLDK DFDKGNRYSV
PYAFTTTLVG YNKTELDKLG IDPADWSVIF DPAVLEKIKG RVTVMDDPQE LFGAALKYLG
HSANDTDPQH WKEAQALILA AKPYWAAFNS SSYIKELTLG NIWVAHGYSS DMYQARADAE
AAGRAFKVDF ALPRQGAVLA IDSMVIHKGS RNPDLAYRFI DFMLDGRNAS ELTNQIGTGT
PNAAAQPFIR PEIRTLAALF PDAATQARLE PLKDLNSRQR RALNRLWTEI KLR
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