Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1343 |
Symbol | |
ID | 5359109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1354464 |
End bp | 1355621 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640810396 |
Product | hypothetical protein |
Protein accession | YP_001346727 |
Protein GI | 152987756 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.530892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGCTT CCGACAAGAC CCTCGCCAGC GCCTCTCCGG TGTCCGGCAA CCTCGCGCTG CTCGCGGCCA TCGTGGTGTT CGCCGCGATA ACCCCGACCA TCCTGATGAC CGCCCCCGCC GTCGCCGCGC AACTGGCGGC CCAGTGGCAA CTGAGCCCGG CGCGGGTCGG CGACCTGTTT TCGGTGGAGC TGGGCGCCAT GAGCCTGGCG ACGCTGCCGG CCTTCCATTG GCTGCAACGC GTCGATTGGC GCCACGCGGC GCTGCTCGCC GGCCTGCTGT TCATCGCCGC CAACCTGGCC TCGGCGCTGG CCGGCAGCTA CCCGCTGCTG CTCGCCCTGC GTTTCTGCAG CGCCCTCGCC GGCGGCTCGC TGATGATCCT CTGCCTGTCC AGCGCCGCCA GCACCGCCAC CCCGAGCCGG GTCTACGGGC TCTGGGTGAT GGGCCAACTG GTGGTCGGCG CCGTCGGCCT GGCGCTGCTG CCGGCGCTGT TCGAACGCTT CGGCCTGGCC GCCTGCTACC TGTTGCTGGC TGGCCTGATG GGCCTCGCCC TGCCGTTGTC GCGGGCCTTC CCCAGTGGCA GCCCACCGGC GGAAGCCCGC ACCAGTGCCG GCGCGACTCA CTCGCGACTG CGGGTCGGGC TGGGCATCCT CGCCGTGCTC ACCTTCTATA TCAGCCTCAG CGGTGTCTGG ACCTTCATCG GCGCCATCGC CGAAGGCGCG GGGATCGGAG CCGGCGCCAG CGGCGAGGTA CTCGCCGTCG CCACTCTGAT GGGCATCGCC GGGGCGGCCT GCGCCTCCTT CATCGGCAAC CGCCTGCCGC GCGACCTGAT GCTGCTCGGC GGCTACCTGG CGATGGCCGC GGCGATCCTC CTGCTGATCG GCCAGCCGCC GCTGGCGCGC TTCGCCCTGG CCGCGCTGCT GTTCAAGTTC ACCTGGACCT TCGCCCTGCC GTTCATCCTC GCCTGCCTCG CCGACCTGGA CCGCTCCGGC CGCCTGATGA ACGCCTCCAA CCTGGTCATC GGCGGCGGGC TGGCCATCGG CCCGGCGCTG GCCGGACGAC TCATCGAAAG CAGCGGCGGT TTCCTCCCGC TGCTGCCGAT CGCCGCCGGC CTGGCCGGCC TCTCGTTGCT GCTGGCCCTG GCCTGCCGGC CACGCTGA
|
Protein sequence | MNASDKTLAS ASPVSGNLAL LAAIVVFAAI TPTILMTAPA VAAQLAAQWQ LSPARVGDLF SVELGAMSLA TLPAFHWLQR VDWRHAALLA GLLFIAANLA SALAGSYPLL LALRFCSALA GGSLMILCLS SAASTATPSR VYGLWVMGQL VVGAVGLALL PALFERFGLA ACYLLLAGLM GLALPLSRAF PSGSPPAEAR TSAGATHSRL RVGLGILAVL TFYISLSGVW TFIGAIAEGA GIGAGASGEV LAVATLMGIA GAACASFIGN RLPRDLMLLG GYLAMAAAIL LLIGQPPLAR FALAALLFKF TWTFALPFIL ACLADLDRSG RLMNASNLVI GGGLAIGPAL AGRLIESSGG FLPLLPIAAG LAGLSLLLAL ACRPR
|
| |