| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1159 |
|---|
| Symbol | |
|---|
| ID | 5357995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 1155056 |
|---|
| End bp | 1156531 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640810213 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001346545 |
|---|
| Protein GI | 152987089 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2081] Predicted flavoproteins |
|---|
| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.11907 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCGCGCC GCCCTCCCGG CGAGAGGGCA GAAATGTCCA CAAAGCATGT GGAGCCAGCT
GTGGACAAGA TGCGAAAAAC GGCTTGCGCA CCGCGCCACC GCTGGCTCCG CGAGAATCGA
TCATTTCCCG ACCAGACGCC GCGCCGGGAG GCTTCGTGGT TCCCGGGGCT CGGAGCCGCT
CTTCGCCTCG GGTACACTGC GCGCCTGTTT CCTCCAGTCA CGCGCGTCAT CCACATGCCC
AGCCAACCCC ATCGCCCCTC CCCCCGAGTC GCCATCATCG GCGGCGGCCC CGCTGGCCTG
ATGGCCGCGG AAGTCCTGAG CAGGGAGGGC GTGCGTACGG AAGTGTTCGA TGCCATGCCT
TCGGTCGGCC GCAAGTTTCT CCTCGCGGGC GTCGGCGGCA TGAACATCAC CCATGCGGAA
GCCAAGGCGC AATTTCTCAG CCGCTATGGA AAGCGCCGGG AAGAAATTTC CGGATTGCTC
GGAGATTTCG ATGCGGAAGC CCTGCGCGCC TGGATCCATG ACCTGGGCAT CGACACCTTC
GTCGGCAGCT CCGGCCGGGT CTTCCCCACG GACATGAAGG CCGCCCCCCT GCTCCGCGCC
TGGCTCAAGC GCCTGCGCGA GCAGGGCGTG CTCATCCATA CCCGCAGCCG CTGGCTGGGT
TGGCACCCGG ATGGCGCGCT GGACATCCAG AGCGGCAGCG AACGCCAGAC GCTGCGGGTC
GATGCCATGA TCCTCGCCCT CGGCGGCGGC AGTTGGCGCC GCCTGGGCTC CGATGGCGCC
TGGGTGCCCC TGTTGCAGGC GCGCGGGATC GAGGTCGAGG CCCTGCGCCC GAGCAATTGT
GGTTTCGAGT GCGTCGGCTG GAGCGAGCTG TTCCGCGACA GGTTCGCCGG CGCGCCGGTC
AAGCCGGTGG CCATGGGCTT GCCGGGCGAC ACGCCGCGCC AGGGCGAGTT CGTCGTCACC
GGCAACGGCA TCGAGGGCAG CCTGGTCTAT GCGCTGTCCG CCGCGATCCG CGCTCGGATC
GAAACGCAGG GGGCGGCCGA CGTACTGCTC GACCTGCTGC CGAACCGGAG CCACGAGCAG
ATCGAGAAGG CCCTGTCCCG ACCGCGCGGT TCCCGTTCGA TGGCCAACCA CCTGCGCAGC
CAGCTGGGTA TCGACGGGGT ACGCGCCGGC CTGCTGCGCG AACTCTCGCC CGCCGACACC
TACGCCGATC CGGCCCGCCT GGCGGCGGCG ATCAAGCGCC TGCCATTGCG GCTGCTGCGT
CCGCGTCCGC TGGACGAGGC GATCAGCAGC GCCGGCGGCG TGCGCTTCGA GGCGCTCGAT
CGCAAGCTGA TGCTCAAGGT CCTGCCCGGG GTGTTCTGCG CCGGCGAAAT GCTCGACTGG
GAGGCGCCCA CCGGCGGCTA CCTGCTGACC GCCTGCTTCG CCAGCGGGCG CGTGGCGGGG
CTGGGCGCGC TGGAGTGGTT GCGCGGCAGG CGCTAG
|
|---|
| Protein sequence | MPRRPPGERA EMSTKHVEPA VDKMRKTACA PRHRWLRENR SFPDQTPRRE ASWFPGLGAA
LRLGYTARLF PPVTRVIHMP SQPHRPSPRV AIIGGGPAGL MAAEVLSREG VRTEVFDAMP
SVGRKFLLAG VGGMNITHAE AKAQFLSRYG KRREEISGLL GDFDAEALRA WIHDLGIDTF
VGSSGRVFPT DMKAAPLLRA WLKRLREQGV LIHTRSRWLG WHPDGALDIQ SGSERQTLRV
DAMILALGGG SWRRLGSDGA WVPLLQARGI EVEALRPSNC GFECVGWSEL FRDRFAGAPV
KPVAMGLPGD TPRQGEFVVT GNGIEGSLVY ALSAAIRARI ETQGAADVLL DLLPNRSHEQ
IEKALSRPRG SRSMANHLRS QLGIDGVRAG LLRELSPADT YADPARLAAA IKRLPLRLLR
PRPLDEAISS AGGVRFEALD RKLMLKVLPG VFCAGEMLDW EAPTGGYLLT ACFASGRVAG
LGALEWLRGR R
|
|---|
| |