Gene PSPA7_1057 details

Gene Information

• Locus tag: PSPA7_1057
• Symbol: dxs
• ID: 5355602
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: -
• Start bp: 1054839
• End bp: 1056722
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640810111
• Product: 1-deoxy-D-xylulose-5-phosphate synthase
• Protein accession: YP_001346443
• Protein GI: 152984765
• COG category: [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG1154] Deoxyxylulose-5-phosphate synthase
• TIGRFAM ID: [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCAAGA CGCTCCATGA GATTCCCCGC GAGCGCCCCG CCACGCCCCT GCTCGACCGC 
GCCTCTTCGC CGGCCGAGCT GCGCCGGCTG GGCGAGGCGG ACCTGGAAAC CCTGGCCGAC 
GAGCTGCGCC AGTACCTGCT GTATACCGTC GGCCAGACCG GCGGTCACTT CGGCGCCGGC 
CTCGGCGTGG TCGAACTGAC CATCGCCCTG CACTACGTCT TCGACACTCC GGACGACCGC 
CTGGTCTGGG ACGTCGGCCA CCAGGCCTAT CCGCACAAGA TCCTCACCGA GCGCCGCGAG 
CTGATGGGCA CCCTGCGCCA GAAGGACGGC CTGGCCGCCT TCCCGCGTCG CGCCGAGAGC 
GAATACGACA CCTTCGGCGT CGGTCATTCC AGCACCTCCA TCAGCGCCGC CCTCGGCATG 
GCCATCGCCG CCCGCCTGCA GGGCAAGGAG CGCAAGTCGG TGGCGGTGAT CGGCGACGGC 
GCGCTGACCG CCGGCATGGC CTTCGAGGCG CTCAACCATG CCTCGGAAGT CGACGCCGAC 
ATGCTGGTGA TCCTCAACGA CAACGACATG TCGATCTCGC ACAATGTCGG CGGACTCTCC 
AACTACCTGG CGAAGATCCT CTCCAGCCGC ACCTACAGCA GCATGCGCGA GGGCAGCAAG 
AAGGTCCTCT CGCGCCTGCC CGGGGCCTGG GAGATCGCCC GCCGCACCGA GGAATACGCC 
AAGGGCATGC TGGTCCCCGG CACCCTGTTC GAGGAACTCG GCTGGAACTA CATCGGCCCG 
ATCGACGGCC ACGACCTGCC GACCCTGGTC GCCACCCTGC GCAACATGCG CGACATGAAG 
GGTCCGCAGT TCCTTCACGT GGTGACCAAG AAAGGCAAGG GCTTCGCCCC GGCCGAGCTG 
GACCCCATCG GCTACCACGC GATCACCAAG CTGGAAGCCC CCGGCAGCGC GCCGAAGAAG 
ACCGGTGGCC CGAAGTACTC CAGCGTCTTC GGCCAGTGGC TGTGCGACAT GGCCGCCCAG 
GACGCGCGCC TGCTCGGCAT CACCCCGGCG ATGAAGGAAG GCTCCGACCT GGTGGCCTTC 
AGCGAACGCT ACCCGGAACG CTACTTCGAC GTCGCCATCG CCGAGCAGCA CGCCGTGACC 
CTGGCCGCCG GCATGGCCTG CGAGGGCATG AAGCCGGTGG TGGCGATCTA CTCGACCTTC 
CTCCAGCGCG CCTACGACCA ACTGATCCAT GACGTCGCCG TGCAGCACCT CGACGTGCTC 
TTCGCCATCG ACCGCGCCGG CCTGGTCGGC GAGGACGGAC CGACCCACGC CGGCAGCTTC 
GACATCTCCT ACCTGCGCTG CATCCCCGGC ATGCTGGTGA TGACCCCCAG CGACGAGGAC 
GAGCTGCGCA AGCTGCTCAC CACCGGCTAC CTGTTCGACG GCCCGGCCGC GGTGCGCTAT 
CCGCGCGGCA GCGGCCCCAA CCACCCGATC GATCCCGACC TGCAGCCGGT GGAGATCGGC 
AAGGGCGTGG TCCGCCGCCG TGGCGGCAAG GTCGCCCTGC TAGTCTTCGG CGTGCAACTG 
GCGGAGGCGA TGAAGGTCGC CGAAGGGCTC GACGCCACGG TCGCCGACAT GCGTTTCGTC 
AAACCCCTCG ACGAAGCCCT GGTGCGCGAA CTGGCGGGCA GCCACGAACT GCTGGTGAGC 
ATCGAGGAAA ACGCGGTGAT GGGCGGCGCC GGCTCGGCGG TCGGCGAGTT CCTCGCCCGC 
GAGGGCCTCG AAGTCCCGCT GCTGCAACTG GGCCTGCCCG ATTACTACGT CGAGCACGCC 
AAGCCCAGCG AGATGCTCGC CGAGTGCGGC CTGGATGCCG CCGGCATCGA AAAAGCCGTG 
CGCCAGCGCC TCGACCGGCA GTAG 

 

Protein sequence

MPKTLHEIPR ERPATPLLDR ASSPAELRRL GEADLETLAD ELRQYLLYTV GQTGGHFGAG 
LGVVELTIAL HYVFDTPDDR LVWDVGHQAY PHKILTERRE LMGTLRQKDG LAAFPRRAES 
EYDTFGVGHS STSISAALGM AIAARLQGKE RKSVAVIGDG ALTAGMAFEA LNHASEVDAD 
MLVILNDNDM SISHNVGGLS NYLAKILSSR TYSSMREGSK KVLSRLPGAW EIARRTEEYA 
KGMLVPGTLF EELGWNYIGP IDGHDLPTLV ATLRNMRDMK GPQFLHVVTK KGKGFAPAEL 
DPIGYHAITK LEAPGSAPKK TGGPKYSSVF GQWLCDMAAQ DARLLGITPA MKEGSDLVAF 
SERYPERYFD VAIAEQHAVT LAAGMACEGM KPVVAIYSTF LQRAYDQLIH DVAVQHLDVL 
FAIDRAGLVG EDGPTHAGSF DISYLRCIPG MLVMTPSDED ELRKLLTTGY LFDGPAAVRY 
PRGSGPNHPI DPDLQPVEIG KGVVRRRGGK VALLVFGVQL AEAMKVAEGL DATVADMRFV 
KPLDEALVRE LAGSHELLVS IEENAVMGGA GSAVGEFLAR EGLEVPLLQL GLPDYYVEHA 
KPSEMLAECG LDAAGIEKAV RQRLDRQ