| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0897 |
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| Symbol | ddlA |
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| ID | 5355290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 897381 |
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| End bp | 898421 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640809951 |
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| Product | D-alanine-D-alanine ligase A |
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| Protein accession | YP_001346283 |
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| Protein GI | 152987968 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.121426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACAGG ACAAGTTGAA GGTCGCCGTT CTCTTCGGCG GCAGCAGTGA GGAGCGGGAC
GTCTCCATCG CCAGCGGCGC GCAGGTGATC CAGGCGCTGC GCAGCGCCGG CCACGAGGTG
CTGGCGGTGG ATACCGCCAG CGGCCTGCTC GGCGCGGAGG AAGAGCGGCG CCTGCTGGCG
AGCAAGGTGA AGGAGGTTCC GCCGGATTCC GACTCGCTGG CGATCATCCG CAGCGGCAAG
CAGGGCCTGC TGAGCGCCGG CGAGCTGGCC GGGGTCGACG TGTTCTTCCT CGCCCTGCAC
GGCGGCACCG GCGAGGACGG CACCCTGCAG GCGCTGCTGG ATGCCGGCGG CTTCGCCTAT
ACCGGCAGCG GCCACCTGGC CAGCGCCATG GCGATGGACA AGGACGTGGC CAAGCGCCTG
TTCCTCGCCG CCGGGGTGGA GACCGCCAGC TGGCTGATGG CGCCGGCCTC GGAAGAGGCG
GTGCGCGAGC AACTGGGCTT CCCCCTGGTG GTCAAGCCGA ACAGCCAGGG CTCCACCGTG
GGGCTGTCCA TCGTGCATTC CCAGGCCGAA TTGCAGCCGG CCATCGAACT GGCCGGGCGC
TATGGCGACG AGGTGATGCT GGAGCGCTTC GTCGCCGGCC GCGAGGTCAC CGTCGGGGTG
CTCGACGACC AGGCGCTGCC GGTGGGCGAG ATTCTCCTCG GCGGCCAGGA AGTCTTCGAC
TACGAGCACA AGTACCAGGC CGGCGCGGTG CGCGAGGTGT TTCCCGCCGA CCTGCCGCCG
GCGGTCGCCG CCGAGGCCCA GCGCCTGGCG CTGAAGGTGC ACCGGGCGCT GAAGCTGAGC
GGCTACAGCC GCACCGACTT CCGCCTCGAC GAACAGGGCC GGCTCTGGTG CCTGGAGGTC
AATACCCTGC CGGGAATGAC CGCCACCAGC CTGCTGCCGC AGGCCGCGGC GGCGGCCGGG
ATCGGTTTCG CCGAACTCTG CGAGCGGATC TGCCGGCTCG GCATCCAGCG TTGCAAGGGC
GCGCGCAAGG CGCGTTGCTG A
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| Protein sequence | MGQDKLKVAV LFGGSSEERD VSIASGAQVI QALRSAGHEV LAVDTASGLL GAEEERRLLA
SKVKEVPPDS DSLAIIRSGK QGLLSAGELA GVDVFFLALH GGTGEDGTLQ ALLDAGGFAY
TGSGHLASAM AMDKDVAKRL FLAAGVETAS WLMAPASEEA VREQLGFPLV VKPNSQGSTV
GLSIVHSQAE LQPAIELAGR YGDEVMLERF VAGREVTVGV LDDQALPVGE ILLGGQEVFD
YEHKYQAGAV REVFPADLPP AVAAEAQRLA LKVHRALKLS GYSRTDFRLD EQGRLWCLEV
NTLPGMTATS LLPQAAAAAG IGFAELCERI CRLGIQRCKG ARKARC
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