| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0795 |
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| Symbol | speD |
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| ID | 5355584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 792759 |
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| End bp | 793553 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640809849 |
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| Product | S-adenosylmethionine decarboxylase |
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| Protein accession | YP_001346190 |
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| Protein GI | 152986415 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1586] S-adenosylmethionine decarboxylase |
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| TIGRFAM ID | [TIGR03331] S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAAGCA AACTCAAGCT CCACGGGTTC AACAACCTGA CGAAGACCTT GAGCTTCAAC
ATCTACGACA TCTGCTACGC CGAGACGCCC GAAGACCTCC AGGCCTACGT GCAGTACATC
GACGAAGAGT ACGACGCGGA GCGTCTGACG CAGATTCTTA CCGATGTTGT CGACATCATC
GGCGCCAATA TCCTGAACAT CGCACGTCAG GACTACGACC CCCAGGGCGC CAGCGTGACC
ATCCTGATCT CCGAGCAGCC GGTCACCCCG ACCGACAGCC AGATCGAAGA GTCCCCGGGC
CCGCTGCCGG ACACCATCCT GGCGCACCTG GATAAAAGCC ACATCACCGT GCATACCTAC
CCGGAAATCC ATCCGGTGGA CGGCATCGCG ACCTTCCGCG TGGACATCGA CGTATCCACC
TGTGGGGTGA TCTCCCCGCT GAAGGCCCTC AACTACCTGA TCCACCAGTT CGATTCGGAC
ATCGTCACGG TCGACTACCG GGTCCGCGGC TTCACCCGCG ACATCGAGGG GCGCAAGCAC
TTCATCGACC ACGAGATCAA CTCGATCCAG AACTATCTCT CCGACGACAC CCGCGAGGCC
TACCAGATGA CCGACGTGAA CGTGTACCAG GAGAACCTGT TCCACACCAA GATGCTGCTC
AAGGACTTCG AACTGGAGAA CTACCTGTTC GGCGACGCCA CCCGCAACCT CTCGGCGGAG
CAGCGCGAGC AGGTCACCGA GCGGCTCAGG CACGAGATGC TGGAGATCTT CTACGCGCGC
AACATGCCGC ACTGA
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| Protein sequence | MKSKLKLHGF NNLTKTLSFN IYDICYAETP EDLQAYVQYI DEEYDAERLT QILTDVVDII
GANILNIARQ DYDPQGASVT ILISEQPVTP TDSQIEESPG PLPDTILAHL DKSHITVHTY
PEIHPVDGIA TFRVDIDVST CGVISPLKAL NYLIHQFDSD IVTVDYRVRG FTRDIEGRKH
FIDHEINSIQ NYLSDDTREA YQMTDVNVYQ ENLFHTKMLL KDFELENYLF GDATRNLSAE
QREQVTERLR HEMLEIFYAR NMPH
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