Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0286 |
Symbol | |
ID | 5357413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 299935 |
End bp | 300969 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640809340 |
Product | ABC transporter periplasmic binding protein |
Protein accession | YP_001345682 |
Protein GI | 152985790 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACCAAC GCATCGCACG CATCGGCCTC GGCCTCAGTA TCGTCCTCGG CGGCAGCGCC CAGGCCGCCG GGCAACTCAA CGTGGTCAGC TGGAGCGGCT ATTTCTCACC GCAGCTGCTG GAGAAATTCG AGAAGGAGAG CGGCATCCGC GTCACCGTGG ACTCCTATGA CTCCAACGAG ACGCTGCTGG CCAAGCTCAA GCAGGGCGGC GCCGGCTACG ACGTGGCGAT CCCCTCGCAG CAGTTCGTCC CGATCCTGGT CGAGGAGCGG TTGCTGGAGC GCTTCGACCC GGCCGCCGAA CCCTACTACG CCAACCTGGT CGACAACCTG AAGAAACCCG CCTGGGACCC GGAGGGCGCC TACAGCGTGC CCTTCATCTG GGGCACCACC AGCGTGGTGC TGGACGGCGC GCGCTACGCC GGGCCGGCCG ACAGCTACGC GGTGCTCTAC CAGCCGCCGG AGGAACTGCG CGGGCGGATC AACATGTTCG ACTCGGTGAG CGAGGTGGTG GACATGGCCA GCCTGTACCT GGGCATCCCG CTCTGCAGCG AGGACCCGAA GCAGATGCAG CGCGTCCTCG ACCTGCTCAA GGCGCAGAAG CCCTTCGTCA AGACCTACAG CTCCAAGGCC GGCTCGATCC GCGAGAACCT CGCCGCGGGC GAGGTGGACA TGTCGATGTT CTGGGGCGGC TCGTCGCTGC GCGCGCGCGA ACTCAAGCCG AGCCTGAAGT ACCTGTATCC GAAGGAAGGC GTGCTGGCCT GGGTCGACAA CCTGGTGATC CCGCGCGGCA GCCGCAATCC GGACAACGCG CGGCGCTTCA TCGCCTTCCT CGCCCAGCCG GAGAACGCCG CGCTGACGCA GAACTTCCTC AAGCACCAGA GTCCGGTGAA GGGCGTCGAG CCCTACCTCG AACCCGGCCT CAAGGACGCC CCGGAGTTGC ATGTCCCCGA AGGCACCCGC GTGGTGTTCA GCCAGACCTG CGGCGAAGCC GCGATCCGCC TGGCCGACCG CCTGTGGACC AACCTGATGC GCTGA
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Protein sequence | MYQRIARIGL GLSIVLGGSA QAAGQLNVVS WSGYFSPQLL EKFEKESGIR VTVDSYDSNE TLLAKLKQGG AGYDVAIPSQ QFVPILVEER LLERFDPAAE PYYANLVDNL KKPAWDPEGA YSVPFIWGTT SVVLDGARYA GPADSYAVLY QPPEELRGRI NMFDSVSEVV DMASLYLGIP LCSEDPKQMQ RVLDLLKAQK PFVKTYSSKA GSIRENLAAG EVDMSMFWGG SSLRARELKP SLKYLYPKEG VLAWVDNLVI PRGSRNPDNA RRFIAFLAQP ENAALTQNFL KHQSPVKGVE PYLEPGLKDA PELHVPEGTR VVFSQTCGEA AIRLADRLWT NLMR
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