Gene PP_5420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5420 
SymbolatpI 
ID1042004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6181453 
End bp6181860 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content55% 
IMG OID637148818 
ProductF0F1 ATP synthase subunit I 
Protein accessionNP_747520 
Protein GI26992095 
COG category[C] Energy production and conversion 
COG ID[COG3312] F0F1-type ATP synthase, subunit I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000160369 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAATAC GCACGCCAAA CCGCCTGCCT TTCCATCGCT GGGCGGTTTT TCCGGTACTG 
CTGGCTCAAT TTGTCGTACT GCTGCTGGCA ACCTTGGTGT TGTGGCAGTG GAAAGGGTCG
GTCAGTGGAT ATTCAGGCCT TTGCGGAGGT TTGATTGCCT GGCTGCCCAA TGTGTATTTC
GCCTGGAAGG CTTTTCGCTT CAGCGGGGCT CGGGCGGCAC AAGCTATCGT CAAGTCGTTT
TACGCTGGCG AGGCAGGCAA GATGATTTTG ACGGCAGTGC TTTTTGCACT GACCTTTGCA
GGAGTGAAGC CACTGGCGCC GCTAGCAGTA TTCGGCGTCT TCGTGTTGAC CCTTTTGGTC
AGCTGGTTCG CGCCCCTGCT GATGAATAAA AGACTTTCGA GACCTTAG
 
Protein sequence
MEIRTPNRLP FHRWAVFPVL LAQFVVLLLA TLVLWQWKGS VSGYSGLCGG LIAWLPNVYF 
AWKAFRFSGA RAAQAIVKSF YAGEAGKMIL TAVLFALTFA GVKPLAPLAV FGVFVLTLLV
SWFAPLLMNK RLSRP