| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5402 |
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| Symbol | |
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| ID | 1042029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 6159521 |
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| End bp | 6160309 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637148800 |
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| Product | Sir2 family transcriptional regulator |
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| Protein accession | NP_747502 |
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| Protein GI | 26992077 |
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| COG category | [K] Transcription |
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| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00282783 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAATT TGCGAAGAGC TGCTGAGGCT TTGCGCAGGT CCAAGACAGT GGTCTTTTTC
ACGGGCGCCG GCATCTCTGC TGACAGCGGA ATTCCGACTT TCCGCGACAA GCTGACAGGG
CTTTGGGCGA AGCACGACCC TCAACGTTTG GAAACAGCTG ACGCCTTCCG AGCGAACCCA
ACTCTTGTCT GGAGCTGGTA TCTCTGGCGC CGACACCAGG TAAGCCAGGC AAAACCCAAC
TCGGCCCATC TATCTATTCC GCAGTTAGCT GACGCTGGCT GGGACGTATC TGTCGTTACA
CAGAACATCG ATGATTTGCA TGAACGAGCC GGCTCCAGTC CGGTCGTGCA CCTTCATGGC
AGCTTGATGG ACGTGAAGTG CTTCGGATGC CACCGGCCAG CAGAGTTGTC GCCAGATCAA
CTGGCGGTTC CCCTGGAGGG ACAACTGATC GAGCCTCCGC GGTGTACTCG ATGTAACGGA
AGACTGCGCC CTGGAGTGGT CTGGTTCAGG GAGAATCTTC CAGATAACGC GTGGCGTTCA
GCAGTAAGGC TTGTGAGAGC CTGTGATTTG CTGGTTTCGG TGGGCACTTC TGGTGTTGTC
ATGCCGGCAG CCGGTATTCC AGATATGGCT CTGGCGGTCG GGGCAACGGT GATCCATGTG
AACCTTGAAG ACGTGGGAAT GGACGGAGCG GACGAGATAA TGCTCGAAGG ACCTGCAGGG
GTGGTATTAC CCGCGTTGCT TCAAGCCACA GGGGTTGCTG CTCTGTCTCC GCCTGGCGTT
CCTACTTAA
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| Protein sequence | MSNLRRAAEA LRRSKTVVFF TGAGISADSG IPTFRDKLTG LWAKHDPQRL ETADAFRANP
TLVWSWYLWR RHQVSQAKPN SAHLSIPQLA DAGWDVSVVT QNIDDLHERA GSSPVVHLHG
SLMDVKCFGC HRPAELSPDQ LAVPLEGQLI EPPRCTRCNG RLRPGVVWFR ENLPDNAWRS
AVRLVRACDL LVSVGTSGVV MPAAGIPDMA LAVGATVIHV NLEDVGMDGA DEIMLEGPAG
VVLPALLQAT GVAALSPPGV PT
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