Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5388 |
Symbol | |
ID | 1042071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 6143410 |
End bp | 6143751 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637148787 |
Product | hypothetical protein |
Protein accession | NP_747489 |
Protein GI | 26992064 |
COG category | [S] Function unknown |
COG ID | [COG5569] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.141167 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGC TCTACCTCAG CATTGCACTG CTCTTTGCCT TCGCATCAGG CGCGCAAGCC CAAGACTCCA TGGCCGGGAT GAGCATGGAT GGAATGGATA TGAAGGAAAC CCAATCAGCA CCTTCCGCTC ATGCAGAAGG GACGGTAAAG GCAATTGACG CCCAAGGCGG CACAGTGACC CTGATGCATG GACCGGTTGC TGCGTTGAAA TGGCCGGCCA TGACCATGGC CTTCAAAGCC TCTGCGCAAC AGCTCGATGG ATTGAAGGTG GGAGACAACG TAGAGTTTGA TTTCCGGATG GATGGCAGCA CGGCAACGAT TGTTGATATT CGCAAACAGT AA
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Protein sequence | MKKLYLSIAL LFAFASGAQA QDSMAGMSMD GMDMKETQSA PSAHAEGTVK AIDAQGGTVT LMHGPVAALK WPAMTMAFKA SAQQLDGLKV GDNVEFDFRM DGSTATIVDI RKQ
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