| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5377 |
|---|
| Symbol | |
|---|
| ID | 1042086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 6129195 |
|---|
| End bp | 6129650 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637148776 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_747478 |
|---|
| Protein GI | 26992053 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3019] Predicted metal-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.290226 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCTA ACAGCCGCTT TCTCAGGTTG GCCGCCTTTG CGGCATTCAT CGCGCTGCCG
CCAGTCTACG CAGCCGTACC GACCACGATT GATGTTCATC GGGATGCCAA TTGCGGGTGC
TGTAAAAAGT GGATCGCGCA CTTGGAGCAA AATGGCTTCA AGGTCATTGA CCATGTTGAA
ACCGATATGA GCGCTGTGAA ACAGAGCCTT GGAGTCGCAC CGCGTTTGGC TTCCTGTCAC
ACGGCAGTGA TTGATGGGAA GTTTGTCGAG GGACACGTGC CAGCTGAGCA GGTTCGTGAG
CTGGCAAACA GGGATGATCT GATCGGTGTC GCCGTCCCAG GTATGCCGGC AGGCTCTCCA
GGTATGGAAG TGGATGGTGT CTCTCATGCA TACCAGGTCA TCGGTCTCAA CAAGAGCGGA
CGGGATGAAG TGGTTGCAGA GTATCCAGGC CACTGA
|
|---|
| Protein sequence | MKANSRFLRL AAFAAFIALP PVYAAVPTTI DVHRDANCGC CKKWIAHLEQ NGFKVIDHVE
TDMSAVKQSL GVAPRLASCH TAVIDGKFVE GHVPAEQVRE LANRDDLIGV AVPGMPAGSP
GMEVDGVSHA YQVIGLNKSG RDEVVAEYPG H
|
|---|
| |