Gene PP_5333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5333 
Symbol 
ID1042154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6081006 
End bp6081575 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content60% 
IMG OID637148732 
Producthypothetical protein 
Protein accessionNP_747434 
Protein GI26992009 
COG category[S] Function unknown 
COG ID[COG3495] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00441093 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCGGCA ATTCATTCGA GTTGCCGAGC ATTTTCATGC GTGCCTTTTT CCTCGTCCCC 
TTGCTGTTGG CCAGTACCCT GGCCCATGCC GAACTGCCCG AAACCGACTG GCTGGAGCTG
ATGCCCAGGT CGGACCAGAA GGCGCTCGAA CAAATGCCTG AAATCGACCA CAACTCGCCG
GAAGCCATGG GCACCTTTAC CGCCAAGGGT GGCCTCAAGC AGAGCAAGGG CCTGCCTGCG
GTGATGTACT CGACCAAGAC CGTTGCGGCC ATGAATGGCA AGGACATCCG CCTGGGTGGC
TACCCTGTGC CGCTGGAGAG TGACGCCAAG GGCAACAGCA CGTTGTTCTT CCTGGTGCCG
TACCCGGGTG CGTGCATCCA TGTGCCGCCA CCGCCGCCCA ACCAGTTGGT ACTGGTGCGC
TACCCGAAAG GCCTGAAGAT CGATGATATC TACACCCCGC TGTGGGTCAG CGGCAAGCTG
AAGGTGGAGA AGGTCAGCAA TGACCTGGCC GATGCGGCCT ATGCGCTGGA TGCAGACAAG
GTGAGGGTGG TGGAAGACGC AGACCTTTGA
 
Protein sequence
MLGNSFELPS IFMRAFFLVP LLLASTLAHA ELPETDWLEL MPRSDQKALE QMPEIDHNSP 
EAMGTFTAKG GLKQSKGLPA VMYSTKTVAA MNGKDIRLGG YPVPLESDAK GNSTLFFLVP
YPGACIHVPP PPPNQLVLVR YPKGLKIDDI YTPLWVSGKL KVEKVSNDLA DAAYALDADK
VRVVEDADL