Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5333 |
Symbol | |
ID | 1042154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 6081006 |
End bp | 6081575 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637148732 |
Product | hypothetical protein |
Protein accession | NP_747434 |
Protein GI | 26992009 |
COG category | [S] Function unknown |
COG ID | [COG3495] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00441093 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCGGCA ATTCATTCGA GTTGCCGAGC ATTTTCATGC GTGCCTTTTT CCTCGTCCCC TTGCTGTTGG CCAGTACCCT GGCCCATGCC GAACTGCCCG AAACCGACTG GCTGGAGCTG ATGCCCAGGT CGGACCAGAA GGCGCTCGAA CAAATGCCTG AAATCGACCA CAACTCGCCG GAAGCCATGG GCACCTTTAC CGCCAAGGGT GGCCTCAAGC AGAGCAAGGG CCTGCCTGCG GTGATGTACT CGACCAAGAC CGTTGCGGCC ATGAATGGCA AGGACATCCG CCTGGGTGGC TACCCTGTGC CGCTGGAGAG TGACGCCAAG GGCAACAGCA CGTTGTTCTT CCTGGTGCCG TACCCGGGTG CGTGCATCCA TGTGCCGCCA CCGCCGCCCA ACCAGTTGGT ACTGGTGCGC TACCCGAAAG GCCTGAAGAT CGATGATATC TACACCCCGC TGTGGGTCAG CGGCAAGCTG AAGGTGGAGA AGGTCAGCAA TGACCTGGCC GATGCGGCCT ATGCGCTGGA TGCAGACAAG GTGAGGGTGG TGGAAGACGC AGACCTTTGA
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Protein sequence | MLGNSFELPS IFMRAFFLVP LLLASTLAHA ELPETDWLEL MPRSDQKALE QMPEIDHNSP EAMGTFTAKG GLKQSKGLPA VMYSTKTVAA MNGKDIRLGG YPVPLESDAK GNSTLFFLVP YPGACIHVPP PPPNQLVLVR YPKGLKIDDI YTPLWVSGKL KVEKVSNDLA DAAYALDADK VRVVEDADL
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