Gene PP_5324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5324 
Symbol 
ID1042178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6069745 
End bp6070635 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content62% 
IMG OID637148723 
Productresponse regulator receiver protein 
Protein accessionNP_747425 
Protein GI26992000 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0104194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAG TGAATGTGCT GGTCGTGGAT GACGCCCCGT TTATCCGTGA TCTGGTCCGC 
AAGTGTCTGC GTAATGCCTT CCCGGGTATG GCCATCGACG ACGCTATCAA CGGTCGCAAG
GCCATGGCCA TGCTCGGCAA GGAAGCGTTC GACCTGGTCC TGTGCGACTG GGAAATGCCG
GAAATGTCTG GCTTGGAATT GCTGACCTGG TGCCGTCAGC AGCCTGCACT GAAGAACCTG
CAGTTCATCA TGGTGACCAG CCGTGGCGAC AAGGAGAACG TCATTCAGGC GATCCAGGCG
GGTGTTTCCG ATTTTGTAGG CAAGCCGTTC ACCAACGAGC AACTGCTGAC CAAGGTAAAG
AAAGCCCTGA CCAAGATCGG TAAGCTCGAC AGCCTGATGG CCATCGGCCC GGCGCGAGCC
AACCCGGCCT TTGCCAACGA CTCGTTGAAC GCGCTGACTG CGGGCAAGCC CGAAGCGGTC
AAGGTGGCGG CGCCGACACC GGCACCGGCC AAGCCTTTGG TCGCGGCGCC CGCACCTGCC
GCCCCCGCGC CGAGCGGCCG TGGCCAGGGC CAGCTGCGCC TGGCCAGTGG CATGCAGCCA
TGTGTGATCA AGGCGTTGAG CCTGAAAGAG GCACTGCTGG TGGTACGCCG CAGCGAAGCG
CTGCCACAGG TGCTGGAAGG TGCGGTGCTG GACCTGGAGC AGGGCGAAAG TGCCGAAGTT
GCTCGCCTGA ACGGCTACCT GCATGCGGTG GCGGCGCTGG AGCCAAAACC TGACAGCGAC
TGGTTGCAGT TGACGTTCAA GTTTGTCGAC CAGGATGCCC AGAAGCTCGA CTACCTGTCT
CGGTTGATTG CCCGCGGCAC AGCGCAGAAG CACTTCACCC CCGGTGCCTG A
 
Protein sequence
MSKVNVLVVD DAPFIRDLVR KCLRNAFPGM AIDDAINGRK AMAMLGKEAF DLVLCDWEMP 
EMSGLELLTW CRQQPALKNL QFIMVTSRGD KENVIQAIQA GVSDFVGKPF TNEQLLTKVK
KALTKIGKLD SLMAIGPARA NPAFANDSLN ALTAGKPEAV KVAAPTPAPA KPLVAAPAPA
APAPSGRGQG QLRLASGMQP CVIKALSLKE ALLVVRRSEA LPQVLEGAVL DLEQGESAEV
ARLNGYLHAV AALEPKPDSD WLQLTFKFVD QDAQKLDYLS RLIARGTAQK HFTPGA